Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00827 ATGGTTATGGGCATGGCTGCACAGACCAATAAGCTCCACTTGATCACTTTCGTCCTATTCACCTGCTGGTTATCTGTGTCTGCACATGGACAAAACCTGCTAAGCTGTGAGACAACTTCTCCAGATGCTTCTGGCTACCATTGCAGAGCAAACGAGTCAGAAAAGCAGTGTGGTACATTTGCCATTCTTCGTACTAATCCAAACTATTCATCTCTTTCCAACCTCACCTTTTACTTGGGCATCAATCGTTTTGTAGTTGCAGAAGCTAATGGCTTTTCTGCAGACACTGAATTCCTTCCTCATGATCAGCTTCTACTGATACCAATCGACTGTAAGTGTAACAACGGTTTCTTCCAGGCTGAAATCACAAAGACGACCATTGAAGGAGAGAGCTTCTACGGAATTGCTGAATCACTAGGAGGCTTAACAACTTGCAGAGCTATTCAGGACAAGAACCCTCATATCCCACCAACCGGTCTCGGCAATAAACTCAGGCTAGCCATTCCACTGAGATGTGCATGTCCATCTTCAGGTCAACCAAGATTCTTGCTGTCTTATCCGGTACGAGCAGGTGACACAATCTCTAACCTGGCGTTGAAATTCAACATCACCAAAGAAACCATTATATCTGCTAATAACAGATCAGTTGAAACTGAAAGCCTCAGTCCACTTACCTCTCTTTTGATACCACAAAATGGTCAGCCTATTTTTGGACCCCTTGAAAAACCTAGTGAACCCAACGTAAGTCATCCAGCAAATAGTATCCCGGTAATGCAACCGGCCAAGAAAGCCAAAATGTGGAAGATCGGACTGTATATTGGATTGGGTGGAGTTGTAGTTGGAATATGCATTGCTGTTGCAGTTATCTGCTTGGTGATCCAATTGAAGAGGAGAAAGAAAAAATCAGGACAAGGTGTTGATGTTGAGCTACAGCAACTTAGTCTTAGCGTAAGAACGACAAGTGACAAGAAAGTTTCATTTGAAGGTTCACAGGACACTCATGATGGTAAAACTATCGATACCACACCAAGAAAAATGTCATTGGAGATTTTCACCGTTGAGGAGCTGAAAAAGGCAACTGAAGATTTTAGTTCAAGCAATCACATCGAAGGAGCTGTATTTCATGGCCGTCTCAATGGAAAGAATGTTGCAATAAAGCGTTTACAGACAGAAACTATGTCAGAGATTGATTTCAGTCTCTTCCACGATTCACTCCACCATCACCCTAATATTCTGAGGATGTTTGGAACATGTTTTACAGAGGCCCCTGAATCATTCTTAATTTTTGAGTATGCCAGGAATGGTTCCTTGAAAGATTGGCTTCATGGGGGGTTGGCAATGAAGAATCAATTCATTTCATCCTGCTATTGTTTTCTGACATGGAGTCAGAGGTTAAAAATATGTCTAGATGTGGCCATGGCCTTACATTACATGCACCAAGTTATGAATCCAAGCTATGTCCACAGAAACATCAAGAGCAGGAACATCTTTTTAGATGAAGACTTCAATGCAAGGATAGGTAATTTTGGAATGGCCAAATGTGTAGGCAATGAAACTGAAGTCCCAAAATTCTATTCAACCAATCCTGCTTCTTGGAGTTTGGGTTATTTAGCTCCTGAATACATTCACCAAGGCGTAATCTCCACTAGCATCGATATATTCGCATATGGGGTGGTAGTGCTAGAGGTTTTATCAGGGAAAACACCCATTACAAGGCCTAATGAGAAAGGAGAAGGCAGCATTTGGTTGTCAGAGAAAATCAAGTCCATATTGCAGTCAGAGAATGCTGAAGTGTTAAGGGAATGGATGGACAGTGCATTATGTGAGCATTACTGTTTTGACGGAGCTGTAACCTTGGCTAATATTGCAAGGGCTTGTGTGGAAGAAGAAGTCTCTCTGAGACCCACTGCTGGAGATATTGTGAACAAGTTGTCAAGATTGGTTGAAGAATTACCAGATGGTGAGAATCAGTTAATCTCTGAAAGCTCTAGCAAGCCATTGGTAAAGGCAGCTGCTATTACGTTGTGA 2028 0.4216 MVMGMAAQTNKLHLITFVLFTCWLSVSAHGQNLLSCETTSPDASGYHCRANESEKQCGTFAILRTNPNYSSLSNLTFYLGINRFVVAEANGFSADTEFLPHDQLLLIPIDCKCNNGFFQAEITKTTIEGESFYGIAESLGGLTTCRAIQDKNPHIPPTGLGNKLRLAIPLRCACPSSGQPRFLLSYPVRAGDTISNLALKFNITKETIISANNRSVETESLSPLTSLLIPQNGQPIFGPLEKPSEPNVSHPANSIPVMQPAKKAKMWKIGLYIGLGGVVVGICIAVAVICLVIQLKRRKKKSGQGVDVELQQLSLSVRTTSDKKVSFEGSQDTHDGKTIDTTPRKMSLEIFTVEELKKATEDFSSSNHIEGAVFHGRLNGKNVAIKRLQTETMSEIDFSLFHDSLHHHPNILRMFGTCFTEAPESFLIFEYARNGSLKDWLHGGLAMKNQFISSCYCFLTWSQRLKICLDVAMALHYMHQVMNPSYVHRNIKSRNIFLDEDFNARIGNFGMAKCVGNETEVPKFYSTNPASWSLGYLAPEYIHQGVISTSIDIFAYGVVVLEVLSGKTPITRPNEKGEGSIWLSEKIKSILQSENAEVLREWMDSALCEHYCFDGAVTLANIARACVEEEVSLRPTAGDIVNKLSRLVEELPDGENQLISESSSKPLVKAAAITL* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00827 675 ProSiteProfiles Protein kinase domain profile. 359 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00827 675 ProSiteProfiles LysM domain profile. 184 229 IPR018392 -
Pte15g00827 675 FunFam PTI1-like tyrosine-protein kinase 3 432 658 - -
Pte15g00827 675 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 19 651 - -
Pte15g00827 675 Gene3D Phosphorylase Kinase; domain 1 334 431 - -
Pte15g00827 675 Gene3D LysM domain 175 235 IPR036779 -
Pte15g00827 675 Pfam Protein kinase domain 371 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00827 675 SUPERFAMILY Protein kinase-like (PK-like) 341 644 IPR011009 -
Pte15g00827 675 CDD LysM 185 213 IPR018392 -
Pte15g00827 675 Pfam LysM domain 186 213 IPR018392 -
Pte15g00827 675 SMART LysM_2 185 230 IPR018392 -
Pte15g00827 675 SUPERFAMILY LysM domain 185 230 IPR036779 -
Pte15g00827 675 Gene3D Transferase(Phosphotransferase) domain 1 432 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00827 Pte-Chr15 6038896 6041089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00827 45 673 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 43.373 2.29e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte15g00827 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00827 - - qsa:O6P43_004800 955.666