Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00818 ATGGCCGGAGGTATTATTCAGCAGTTATTGAGAAGGAAGTTTCACTCACAATCTAGAAACTCTTTGTTTTGGTCATCAATTGTCTCAAAGAAAGATGAGGCAATGTCTACTGGCTCAAAGTCTTTAAGAACACTTGCACTCCTGGGAGCCGGTGTTTCGGGATGTTTAAGTTTTGCTACTGTTGCAGCTTCATCTGATGAAGCTGAACATGGTTTGGCGGCCCCAAATTATCCATGGCCTCATGAGGGGATTCTCAGTTCATATGATCACGCATCGATCCGTCGCGGCCACCAGGTTTACCAGCAAGTCTGTGCTTCTTGCCATTCGATGTCTCTGATATCATACCGTGATTTGGTGGGTGTTGCATATACGGAGGAGGAGACAAAGGCAATGGCAGCGGAAATCGAGGTGGTAGATGGTCCTAATGATGAGGGTGAGATGTTTACACGGCCTGGCAAACTCAGTGATCGCTTTCCTCAACCATATGCAAATGAACAAGCAGCTAGGTTTGCTAATGGAGGGGCTTATCCTCCAGATTTGAGTCTGATCACCAAAGCTCGTCACAATGGTCAGAACTATGTTTTTGCTCTTCTTACTGGTTACCATGATCCTCCTGCTGGCATTTCTATCCGTGAGGGGCTGCATTATAATCCTTATTTTCCTGGAGGTGCAATTGCCATGCCTAAAATGCTTAATGATGGTGCCGTCGAGTATGAAGATGGTACCCCTGCTACAGAAGCGCAGATGGGCAAGGACGTTGTGACATTTTTGACGTGGGCTGCAGAACCCGAGATGGAAGAGAGGAAACTTATGGGGTTTAAATGGATCTTTGTACTGTCATTGGCACTTCTTCAAGCTGCATATTACCGACGCTTGAAGTGGTCGGTGCTCAAGTCTCGGAAGCTGGTTCTTGATGTTGTCAACTAG 927 0.4649 MAGGIIQQLLRRKFHSQSRNSLFWSSIVSKKDEAMSTGSKSLRTLALLGAGVSGCLSFATVAASSDEAEHGLAAPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYHDPPAGISIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00818 308 FunFam Cytochrome c1, heme protein, mitochondrial 264 308 - -
Pte15g00818 308 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 263 307 IPR021157 -
Pte15g00818 308 PRINTS Cytochrome C1 signature 97 116 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 244 263 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 142 162 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 224 243 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 263 278 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 175 199 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 77 96 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 PRINTS Cytochrome C1 signature 213 224 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 FunFam Cytochrome c1, heme protein 68 263 - -
Pte15g00818 308 Gene3D - 264 307 - -
Pte15g00818 308 PANTHER CYTOCHROME C1 29 306 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 ProSiteProfiles Cytochrome c family profile. 91 198 IPR009056 GO:0009055|GO:0020037
Pte15g00818 308 Gene3D - 68 263 IPR036909 GO:0009055|GO:0020037
Pte15g00818 308 Pfam Cytochrome C1 family 79 295 IPR002326 GO:0009055|GO:0020037
Pte15g00818 308 SUPERFAMILY Cytochrome c 72 262 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00818 Pte-Chr15 5969100 5971824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00818 1 309 Chloroplast and Mitochondria Gene Families AT3G27240 86.084 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00818 K00413 - qsu:111999908 558.14