Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00811 ATGGAGAGGGAGTGGCTACAGCGAGCTCACGGGGTTGCTTGGATGGAAGGTGAAGCGGAAGATTCAGCTTCTTGGACCAGAACTAACCCCGATGCTCAACCCAAAGATGAAGACTTTACATGTATAACTGCCACTGGCGCTGTTGGTTCTTGTCCACATTCTTCTTTCAAATCTATCCTCGAAGGTGACTGGTGCATGACCCAAACTCAGCAACACCCAATTGCTCTCCAAGAGAATAACCATGATAATAAAGATATCCAATTTTGCTCCAATCCAGATGATACTTTTCTGTTACGAACAATTGATTCTTCATCTGCTTGTTCACCTTCATTTGCTCTTGACCCGTCACAGTCGCAGAATTTCTTACCGCAAAAACCATGCTTTCCTTCGCTATTCAATGTTCTTTTCAATAACCCTTTTGACAATGGGTTTGATTTGGGAAGTGAAAGTAGCTTCCCTCACTCGTTTCAATTGAATCACCGTTCTAATTCCTCTGCTATGACGGGTTTCAGGGGTTTGAACTCTGAATATCAGGTGACCCCTTTAGAATTGGCTTCAACATCTGACTTTGCTTGCACTCAGTCGGTGTCAGACAATGCCGTTGCAATCGGGTCTGGTTTTGGCTCGACCGGCTTAGAAGGTCTCGAAGGCCCTGCAAGTGCTCTGTTTCAGAACCGAGCTACGGTTTTGAAGTCCCTTGAGTTCTTACCTACTGTGGATGTACAACCTACTTTGTTTCAGAAGCGAGCGGCGCTTAGACAAAGTTCAAGAGGAGGTGGAGCTGATAAATTGGGCACTCTGGAGATCTTAGCTTCGAGACTGGAAGGAGATTCAGGGGCTCCGGATAGCTTGGGCAAGAAGAGGAAGAAGAATGATGAGGGTGAAATTGAAGAAGCAAGTGTTGATGCTACTGGATGGAATTATGATTCTGATGAGCTGACAGAGAATGTTAGGGTTGAAGAAGATGAAAACAATGGAGGAAGCAATTCCAATGCCAATAATACTGTCACAGGTGGAGACCAGAAGGGGAAGAAGAAAGGGTTACCAGCTAAAAATCTCATGGCTGAGAGGCGGAGGAGGAAGAAGCTGAATGATAGGTTGTATATGCTAAGGTCAATTGTGCCCAAGATCAGCAAGGTTCAAGTTTTTATCTACTGCACTTTTCACTTTTACGCATATCAGCATAGCACTGTCTTTAGTTACAGAACTTAA 1212 0.4455 MEREWLQRAHGVAWMEGEAEDSASWTRTNPDAQPKDEDFTCITATGAVGSCPHSSFKSILEGDWCMTQTQQHPIALQENNHDNKDIQFCSNPDDTFLLRTIDSSSACSPSFALDPSQSQNFLPQKPCFPSLFNVLFNNPFDNGFDLGSESSFPHSFQLNHRSNSSAMTGFRGLNSEYQVTPLELASTSDFACTQSVSDNAVAIGSGFGSTGLEGLEGPASALFQNRATVLKSLEFLPTVDVQPTLFQKRAALRQSSRGGGADKLGTLEILASRLEGDSGAPDSLGKKRKKNDEGEIEEASVDATGWNYDSDELTENVRVEEDENNGGSNSNANNTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSIVPKISKVQVFIYCTFHFYAYQHSTVFSYRT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00811 403 Pfam Helix-loop-helix DNA-binding domain 354 381 IPR011598 GO:0046983
Pte15g00811 403 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 403 IPR011598 GO:0046983
Pte15g00811 403 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 188 380 - -
Pte15g00811 403 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 381 IPR036638 GO:0046983
Pte15g00811 403 MobiDBLite consensus disorder prediction 275 301 - -
Pte15g00811 403 MobiDBLite consensus disorder prediction 323 340 - -
Pte15g00811 403 Gene3D - 341 391 IPR036638 GO:0046983
Pte15g00811 403 MobiDBLite consensus disorder prediction 320 351 - -
Pte15g00811 403 MobiDBLite consensus disorder prediction 280 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00811 Pte-Chr15 5899008 5900219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00811 54 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 42.229 2.89e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g00811 HLH 6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00811 - - qsa:O6P43_006090 404.445