Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00810 ATGGAACAGATGTGTAGGGTGGTTATGATTCTTATGCATTGTTTCTCATTGATTTGGAACTTTTATTTATGCTATTTATTCTTCATAAACTTGCAGATGGATAGGGCTTCGATACTGGGGGATGCCATTGACTATTTGAAGGAGCTGCTGCAACGGATCTCTGATCTCCACAATGAACTGGAGTCAACAACTCCTGGCTCTTCGCTGCCACCTTCTACGAGCTTTCATCCTCTTAATCCACCTCCACTGACCCTTCCCAGTCGTGTCAAGGAAGAATTATGTCCCAGCTCGTTGCCAAGCCCAAAAAACCAACCTGCAAAGGTGGAAGTACGGCTAAGGGAAGGAAGAGCTGTCAACATCCACATGTTTTGTGCCCGCAGACCAGGTCTGTTGTTATCAACCATGAGAACTCTGGATAACCTTGGACTGGACATTCAGCAAGCTGTTATTAGCTGTTTCAATGGCTTTGCTCTGGATGTGTTCCGAGCTGAGCAATGCAGCGACGGTCAGCATGTCCTCCCTGAGCAAATCAAAGAAGTACTCCTGGATACAGCGGGCTTCCTGGACATCATGTGA 576 0.467 MEQMCRVVMILMHCFSLIWNFYLCYLFFINLQMDRASILGDAIDYLKELLQRISDLHNELESTTPGSSLPPSTSFHPLNPPPLTLPSRVKEELCPSSLPSPKNQPAKVEVRLREGRAVNIHMFCARRPGLLLSTMRTLDNLGLDIQQAVISCFNGFALDVFRAEQCSDGQHVLPEQIKEVLLDTAGFLDIM* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00810 191 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 33 187 - -
Pte15g00810 191 SUPERFAMILY ACT-like 118 187 IPR045865 -
Pte15g00810 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 70 IPR036638 GO:0046983
Pte15g00810 191 CDD ACT_UUR-ACR-like 120 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00810 Pte-Chr15 5897377 5898792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00810 32 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 84.962 1.52e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00810 - - tcc:18601120 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00810 15 5897377 5898792 Pte15g00810 15 5897377 5898792 RCT
Pte18g01236 18 24529463 24534045 Pte15g00810 15 5897377 5898792 RCT