Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00809 ATGTCCATCTTGCCTTCCAAAGCTAACAGATCCACCGCGTCGTCTTCATCAACACCTCTTCCTCCGAGCTCTAATCTTCATGGCAACCGCTTACCTCTTCGTCGTTCTCCTCCCTCTTCTCTCTCTTCTCAAGCTCCCCCTTCCCCTCCCTCCACGCCAGAACTTCAAGCCATCAGATCGCTTCAGATCTCTGAATCTCAATCTTCAATTGGCATGTCTTCTCTTCACCACATTTCAGGTGCCTCTGCTCCAGCTGCTGACGAATCCGGTGGATCTTCGGAAGAGGTGAATGTGTCAGGCACTTCACATGGTTTAACGACTTCGGCTTCTCAGCAAAATGTGGAAGCAAATTCTCAGTCCAACTGGACTGGCCAAGAGGTTGGATCATTCCAGTCAAGAGGGAAAGCGTCACCTACCTCTGGTTCTCCTCGAAAACAAAAACTACTAGCTACTGAGCCCTCCCACTTTTATCGAAGGTACCAATCTTCCGGGAGAAAAACCCAGATGGTGAATGGAAATCACCTGTTGAATTTTCATTATAGCCCTATATCTCGTCCTCAATCAAGGGGTCCTCCTCCCCCACCAAGAAAGCAGCAGAAAACAAAGCCATATAACAAGGATCTTTTCCTTCAAGCCAACTTCAAGTTTGTGGTGTTAGATTCAGGAAACTATTCAGCCGAATCCATGGATCCAGACAAACTGTTACAATGGGAGGACATAATCTGCCTCAGGTATTCTACCCCTTTTATGGTTCAGTGTCCAATCTGTTTGGAGTGTCCTCTATGTCCACAAATAACCTCGTGTGGACATATCTTTTGTTTCCCCTGCATCCTGCAATATTTGTTAATGGGCGAGGATGATCATAAAGGTGACTCATGGAAAAGATGCCCTTTATGCTTTGAGATGATATCTCCAAAGGATTTATACACTATTTACATCGAGAATGTCAATCAATATTCTGTTGGTGATACAATTGAATTCTTGCTTTTGACAAGACAAAAGGATTCCTTCACATTAACACACCAAGAGAAAGAGGCAGACTCAGTTACATGTCCTGCTTCCAATTTTCATGACCCATTTTCTAAGTTCATCTTTACATCAGATGTAGAGCTGTCTGTTACAAAAGCTATTTCTGACCTAGATGGTTGGTTAGCAAAGGCAGATTCAGGGCTTGTTGATGATTTGGGGAAGCTTCCATATGTCTGTGCTGCGCTACAACAACTGAAGAAGAGAAAAAAGTATTGGAAGGAGCAAGGCGCTCGGGACGGTGATAAATCTTCTGTATCAGCTGTTTTCTCAGATAATCTCAATCGGAGTAATGGATCCCATGATATAGTATCCAATAAGTCAGATGAAGGTGCTTCTTCAAATCAAAAAGTTGTTATAGAGGAACTATCGGAAGGTGAAACTAAGAATTTATCTTCTTTTGCCGATAAAAGTAACTGTCAAAGGCATTTAGGGGCTTCTAAAGATGTGAAGAATGAACCATACAGGTTTTATCAGGCTGCTGATGGTCAGCATGTGATTCTTCATCCTTTAAACATGAAATGTCTTGTACACCATTATGGAAGCTATGATTCACTACCAGACAGAATTAGTGGAAGGGTCTTGCAACTGGAGACAATAACTCAATCAGAGGCCATGAGAAAGCGGTATCGGTTCCTGAGTCATTTTTCTTTGACAACGACATTTCAGCTTTGTGAAATTGATTTGAATGGAATATTGCCTCCGGATGCTCTTGCACCATTTCTAGATGATATAAAAAAGCGTCAAAAGCAGAGGAAGCAGGTTGCAGAGAAGGAACATAAGGAGAAAATCAAGGCTGAAGCTGCCACCGAGTATATGTCTATACTCCAACTTCGTGGTTATTCACACTCATTTCCTGAAAGCCCTCCCAATTTTTCCATGGAAGATTTCGAAGCCCTTGGTAATCCTGTCGCTTCTACAAGTCCTCCAGTTTCTGGTCAGAGTATGTTGTTTTCAAACGTCACAAGGCTTGGTTTCGCCGCCGCACATGATTCTCCATCCCTAAGAAGTCAAGAGACAACTTCAATACAGAATCACAGCACAAATACTGAATCTTCGGGAGGAAAAGCAGGTCCAACAAATACAGAGTCTCGATCGTTTGCCGATGTTATATCAAGAGAAAAGTCTCATGAAGGCTTGGATGCACCCAATCCGAAGGATTCGGGGAGAAAGGGGAAGAAGCAATCCCGGGTCCTGTTATCAACATCTGGAGGCCGACGTTATTGA 2253 0.4328 MSILPSKANRSTASSSSTPLPPSSNLHGNRLPLRRSPPSSLSSQAPPSPPSTPELQAIRSLQISESQSSIGMSSLHHISGASAPAADESGGSSEEVNVSGTSHGLTTSASQQNVEANSQSNWTGQEVGSFQSRGKASPTSGSPRKQKLLATEPSHFYRRYQSSGRKTQMVNGNHLLNFHYSPISRPQSRGPPPPPRKQQKTKPYNKDLFLQANFKFVVLDSGNYSAESMDPDKLLQWEDIICLRYSTPFMVQCPICLECPLCPQITSCGHIFCFPCILQYLLMGEDDHKGDSWKRCPLCFEMISPKDLYTIYIENVNQYSVGDTIEFLLLTRQKDSFTLTHQEKEADSVTCPASNFHDPFSKFIFTSDVELSVTKAISDLDGWLAKADSGLVDDLGKLPYVCAALQQLKKRKKYWKEQGARDGDKSSVSAVFSDNLNRSNGSHDIVSNKSDEGASSNQKVVIEELSEGETKNLSSFADKSNCQRHLGASKDVKNEPYRFYQAADGQHVILHPLNMKCLVHHYGSYDSLPDRISGRVLQLETITQSEAMRKRYRFLSHFSLTTTFQLCEIDLNGILPPDALAPFLDDIKKRQKQRKQVAEKEHKEKIKAEAATEYMSILQLRGYSHSFPESPPNFSMEDFEALGNPVASTSPPVSGQSMLFSNVTRLGFAAAHDSPSLRSQETTSIQNHSTNTESSGGKAGPTNTESRSFADVISREKSHEGLDAPNPKDSGRKGKKQSRVLLSTSGGRRY* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00809 750 MobiDBLite consensus disorder prediction 92 147 - -
Pte15g00809 750 MobiDBLite consensus disorder prediction 54 76 - -
Pte15g00809 750 Coils Coil 588 608 - -
Pte15g00809 750 MobiDBLite consensus disorder prediction 1 155 - -
Pte15g00809 750 PANTHER RING FINGER 10 FAMILY MEMBER 83 750 IPR039739 -
Pte15g00809 750 SMART ring_2 253 299 IPR001841 -
Pte15g00809 750 CDD RING-HC_RNF10 251 308 - -
Pte15g00809 750 MobiDBLite consensus disorder prediction 675 709 - -
Pte15g00809 750 ProSiteProfiles Zinc finger RING-type profile. 253 299 IPR001841 -
Pte15g00809 750 MobiDBLite consensus disorder prediction 180 203 - -
Pte15g00809 750 MobiDBLite consensus disorder prediction 710 736 - -
Pte15g00809 750 SUPERFAMILY RING/U-box 252 306 - -
Pte15g00809 750 ProSitePatterns Zinc finger RING-type signature. 268 277 IPR017907 -
Pte15g00809 750 Pfam Zinc finger, C3HC4 type (RING finger) 253 299 IPR018957 GO:0046872
Pte15g00809 750 MobiDBLite consensus disorder prediction 672 750 - -
Pte15g00809 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 314 IPR013083 -
Pte15g00809 750 MobiDBLite consensus disorder prediction 1 25 - -
Pte15g00809 750 MobiDBLite consensus disorder prediction 432 457 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00809 163 700 C3H Transcription Factor Family AT3G26730 53.833 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00809 K26979 - qsa:O6P43_006100 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00809 15 5889968 5894558 Pte15g00809 15 5889968 5894558 RCT