Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00800 ATGGTTCTTCAGAATGACATTGATTTGCTAAACCCCCCAGCCGAGCTGGAGAAAAGAAAGCACAAACTCAAACGTCTTGTTCAGTCACCAAACTCTTTCTTCATGACTGTGTTGTGCCAGCCAACAGGCGGCAGGGCTAGACTAACCGAGGGCTGCTCATTTCGAAAGAAGGGAGACTGA 180 0.4833 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMTVLCQPTGGRARLTEGCSFRKKGD* 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00800 59 Gene3D - 37 58 IPR023407 -
Pte15g00800 59 Gene3D - 1 36 IPR023407 -
Pte15g00800 59 PANTHER 40S RIBOSOMAL PROTEIN S27 1 35 IPR000592 GO:0003735|GO:0005840|GO:0006412
Pte15g00800 59 Pfam Ribosomal protein S27 36 57 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00800 Pte-Chr15 5809995 5811639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00800 1 60 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 64.368 8.82e-33 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00800 K02978 - minc:123230388 103.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00800 15 5809995 5811639 Pte15g00800 15 5809995 5811639 RCT