Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00797 ATGAACCCATCTAGTGCCTCATCCAATAAGAGCAAAAAGAAGCAAGTAGCGATCACCTCAACAACACGAGAACAGAAAGAAACAATTTGGGGAGGAAGATACCTGGGAGTTAGAAGAAGGCCATGGGGAAGGTATGCAGCTGAGATTAGAGACCCTTCAACGAAAGAAAGGCATTGGCTTGGCACATTTGACACAGCTGAAGAAGCTGCTCTGTCTTATGACAGAGCCGCTAGGTCCATGCGTGGCTCTCGTGCTCGCACCAACTTCGTATACTCAGATACCCCACCTGATTGTTCAGTCACCTCCATTATGTCCCCTGATGAACAAGCGCCCCACCAACATACTCATAACCGTGACTGCTCTTTTCTCTTCCTTCAGGGATCGGCTAGCGAGCAACCAAACCCCAGCATCCAATTCGTGGAATCTCATTTTTCGAGTGGCTATCCGACAGTGTCAGCAGAAAACACTTTGGATTCTTTGGGAGTTTATCATCAACTAGAAGAAGATCCCAACCTTGTCAGAGTTGATAACCATTTGAACAGCTTTCGCCACCTATATGATGACAACGACACTGAGCTTCCTCCTTTGCCTTCTTCTGAATTTGATATGTCGGGTTCAGGTAATTGTTTTGCTGAATCCAGCAAGTCGAGCTCGATTAATGAAACGAGTCAAGGAACCTGGAATGTTTTCGGGTATTCGGAGCGTACAAGTGTAGCATCATCTGCGTTCGATTCCTCGTGCATGGGAATGGGATTGGATACAAGCGAGTACGTGCATAGCCCACTATTCAGCAGAATGCCACCTGTTTCAGACACATTCCCAGACAGTTTTGCTTTGGGACATTCAAGTTATTTCTTCTGA 861 0.4634 MNPSSASSNKSKKKQVAITSTTREQKETIWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALSYDRAARSMRGSRARTNFVYSDTPPDCSVTSIMSPDEQAPHQHTHNRDCSFLFLQGSASEQPNPSIQFVESHFSSGYPTVSAENTLDSLGVYHQLEEDPNLVRVDNHLNSFRHLYDDNDTELPPLPSSEFDMSGSGNCFAESSKSSSINETSQGTWNVFGYSERTSVASSAFDSSCMGMGLDTSEYVHSPLFSRMPPVSDTFPDSFALGHSSYFF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00797 286 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Pte15g00797 286 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Pte15g00797 286 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Pte15g00797 286 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Pte15g00797 286 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 189 - -
Pte15g00797 286 CDD AP2 33 89 IPR001471 GO:0003700|GO:0006355
Pte15g00797 286 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Pte15g00797 286 MobiDBLite consensus disorder prediction 1 25 - -
Pte15g00797 286 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Pte15g00797 286 FunFam Ethylene-responsive transcription factor 2 33 91 - -
Pte15g00797 286 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00797 Pte-Chr15 5800879 5801739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00797 1 277 AP2-EREBP Transcription Factor Family AT5G13910 43.158 6.19e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte15g00797 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00797 K09286 - qsa:O6P43_009772 293.123