Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00784 ATGGAGTTTTGCGAAAATGTACCTATTTCCAGTGAATACCAGCGAGAGCAGCCACTCTCTCATCCTTGTTCCTTGTTTTCTGATTCCACAGGAAGTATTGACGACCTATTCAATGCTCAAAACACCGAAGAGGATGTGAACTTGGAATGGCTATCGATTTACGTTGAAGATTGCTTCTCAAACCAAGGAAGCTGTTTTCCAGCGCCTACTAGTGTTAATGTTCCTCTGCAAGCTACTATTACAAGTTATAAACAGGCCTCATCAGGTCACTTGCAGAAAAGCCAGGACAGCTCAAGTCCTCTGCAAAAGTTTTTAGTGCCCGGCAAGGCTAGAAGCAAAAGAAAGAGGGTTACAACCCCCAAAATCAAAAGCTCTTTCTGCACATGGTCAAAGTCACTCCTCAAAAGCCAACCCCTTCATGTTACCGGTTCAGATCCACCTCTTCTCAAACAAGAGTATTGGTGGGCTGACAGTGAACTCATTGTCACCAAGAAGGAGAGTGAGCCTGTTGGGAGATATGATGAGCATCCATCGTCCATAGAAGCAGCTGCGGCAGAGGAGGTGGGGATGAGCATTGTGGGTAGTAATAAGGGCAGTTCGGACAGCTTGGTGGTTGGCGACACTGGACACCAATCAATGCCTAGAAGATGCAGCCATTGCCTTGCACAGAAGACCCCACAATGGAGGGCAGGACCATTGGGTCCAAAGACCTTATGCAATGCATGTGGAGTGAGGTACAAGTCTGGTAGGTTGCTGCCAGAGTATAGGCCAGCAAAAAGTCCTACTTTTGTGAGTTACTTGCACTCTAACTCCCACAAGAAAGTCTTGGAGATGAGAATGGCACCTGTATCTTCCATTCCAAATGACCAGTAG 873 0.4674 MEFCENVPISSEYQREQPLSHPCSLFSDSTGSIDDLFNAQNTEEDVNLEWLSIYVEDCFSNQGSCFPAPTSVNVPLQATITSYKQASSGHLQKSQDSSSPLQKFLVPGKARSKRKRVTTPKIKSSFCTWSKSLLKSQPLHVTGSDPPLLKQEYWWADSELIVTKKESEPVGRYDEHPSSIEAAAAEEVGMSIVGSNKGSSDSLVVGDTGHQSMPRRCSHCLAQKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVLEMRMAPVSSIPNDQ* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00784 290 ProSiteProfiles GATA-type zinc finger domain profile. 211 247 IPR000679 GO:0006355|GO:0043565
Pte15g00784 290 PANTHER GATA TRANSCRIPTION FACTOR 23 281 - -
Pte15g00784 290 FunFam GATA transcription factor 208 288 - -
Pte15g00784 290 CDD ZnF_GATA 216 263 IPR000679 GO:0006355|GO:0043565
Pte15g00784 290 SMART GATA_3 211 265 IPR000679 GO:0006355|GO:0043565
Pte15g00784 290 Pfam GATA zinc finger 217 251 IPR000679 GO:0006355|GO:0043565
Pte15g00784 290 Gene3D - 207 278 IPR013088 GO:0006355|GO:0008270
Pte15g00784 290 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 212 274 - -
Pte15g00784 290 ProSitePatterns GATA-type zinc finger domain. 217 242 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00784 Pte-Chr15 5717192 5718872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00784 42 279 C2C2-Gata Transcription Factor Family AT2G45050 39.167 1.48e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte15g00784 GATA 1.4e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00784 - - zju:107435305 321.627