Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00779 ATGAGAAATCCTCAATCAAACTTGCCACCAGGCTTTAGGTTCCATCCCACCGATGAAGAACTCATCCTTCACTACCTTAGAAAGAAAGTGGTGTCAGCTCCTATCCCAGTTTCCATTATTGCAGAGGTTGATATCTACAAATTTGATCCTTGGGACTTGCCAGGTAAGGCTGTGTTTGGAGAAAAGGAGTGGTACTTTTTCAGTCCTAGAGACAGGAAGTACCCCAATGGTGCCAGGCCAAACAGAGCAGCGGCTTCTGGGTATTGGAAGGCGACTGGGACGGACAAGACCATTGTGGCATCATTAGGAGGAGGTGGAGGGCAAGAGCATATTGGTGTGAAGAAGGCTCTCGTGTTCTATGAAGGAAGACCCCCTAAGGGCGTCAAGACAAATTGGATCATGCATGAATATCGCCTCATGGACAACAATAAACCTGTCAAGTTCAAAGATTCTTCCATGAGGCTAGACGATTGGGTCCTGTGCCGGATTTACAAGAAATCCAAATATGTTTTGCCACCTACACCAGAAGAAACAATGGCTGCAGTCAGTGACCAAGATCAAGATCGGGAACAGTTTGTCAATGATCATACTCTTGTTCCAATTCTTAAACCTCCCCCCAGTGATCAAAACCCAATAATATCCCAGAAATCTTTATCCTTCTCAAACTTATTAGATGCCATGGATTACTCCATGCTCAGTAGCTTTCTCTCTGAAAACCCTCCCAACAACCCAACAGGATTTGATGCAGCTCCTGAATTGCACGGTGGGATTATGCAGCAACCTTTTCAAAATAATACAAACAGCTGCTGCTACTTGTTTCAGAAGCTTCCTGAATTGAACAGTCCTTCACCAAAAGACATGGAAAACCGTCTCAAGAGGCAAAATACAATCATGGATGAAGATACGTCGTCATACCCGTCAAAGAAATACTTGAACTCTTGCAGTTTCATCAACGAGTCTCACCAAACAGGCACACCTCAGTACAACTTACTGAACCAATCATTACTGTTGAATCAGCAGTTACTTTTGAGCCCTCATCTCAGTTTCCAAGGATAA 1056 0.4403 MRNPQSNLPPGFRFHPTDEELILHYLRKKVVSAPIPVSIIAEVDIYKFDPWDLPGKAVFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLGGGGGQEHIGVKKALVFYEGRPPKGVKTNWIMHEYRLMDNNKPVKFKDSSMRLDDWVLCRIYKKSKYVLPPTPEETMAAVSDQDQDREQFVNDHTLVPILKPPPSDQNPIISQKSLSFSNLLDAMDYSMLSSFLSENPPNNPTGFDAAPELHGGIMQQPFQNNTNSCCYLFQKLPELNSPSPKDMENRLKRQNTIMDEDTSSYPSKKYLNSCSFINESHQTGTPQYNLLNQSLLLNQQLLLSPHLSFQG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00779 351 Gene3D NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Pte15g00779 351 FunFam NAC transcription factor 56 17 170 - -
Pte15g00779 351 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Pte15g00779 351 SUPERFAMILY NAC domain 5 166 IPR036093 GO:0003677|GO:0006355
Pte15g00779 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 276 - -
Pte15g00779 351 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00779 Pte-Chr15 5659273 5661219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00779 2 352 NAC Transcription Factor Family AT3G04070 54.342 1.20e-116 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g00779 NAM 4.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00779 - - gmx:100170708 448.358