Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00777 ATGAATGACCTCATGACCAAATCGTTCACAAGCTATGTGGATTTGAAGAAAGCCGCCATGAAAGATTTAGACTTGGAAGCTGGTCTTCCTCCTTCTGACATTGAGATGAGGTCATCTACTACTAACATGGGTCTGTTCTTGGAAGAGGCCGAGAAGGTGAAAATAGAGATGGCTTCACTCCGTGACATACTGACTAGGCTACAACAAGCCAATGAAGAGAGCAAGTCCTTGCACAAGCCTGACACTTTGAAATCCTTAAGGAATAGAATCAACTCCGATATTGTCAATGTGCTAAAGAAGGCGAGGACCATAAGAGGTCAGCTTGAAGATATGGACCAAGCAAATGCTGCTAACAAGAGACTCTCTGGCCTAAAAGATGGCACCCCAGCAATTTACAGGACTAGAATTGCTGTGACCAATGGACTTCGCAAGAAACTCAAGGAGCTCATGATGGATTTTCAGGGACTGAGGCAGAAGATGATGACTGAGTATAAAGAAACTGTGGGAAGACGTTACTTCACTGTGACAGGTGAGTATCCGGATGAAGAGGTCATTGAGAAAATTATCTGTAATGGAGCTGAAGAATTTTTAGGCAAGGCTATACAAGAGCATGGGAGGGGGAAAGTGTTAGAGACTGTGGTGGAGATTCAGGACAGGTATGATGCAGCTAAAGAGATTGAGAAGAGTCTGCTAGAACTTCACCAAGTGTTTCTGGACATGGCTGTTATGGTGGAGGCACAAGGTGAGAAGATGGATGACATAGAGCACCATGTACTTCACGCTTCTCATTATGTCAAGGATGGTACTAAGAATCTGCATGCTGCTAAGCAATACCAAAGGAGTGGGAGGAAATGGATGTGCGTGGGATTGATACTTCTCCTTGTTATTATTCTTGTCATTGTCATCCCCATCATTACTAGTTTCTCTAGTTCTTGA 936 0.437 MNDLMTKSFTSYVDLKKAAMKDLDLEAGLPPSDIEMRSSTTNMGLFLEEAEKVKIEMASLRDILTRLQQANEESKSLHKPDTLKSLRNRINSDIVNVLKKARTIRGQLEDMDQANAANKRLSGLKDGTPAIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMTEYKETVGRRYFTVTGEYPDEEVIEKIICNGAEEFLGKAIQEHGRGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTKNLHAAKQYQRSGRKWMCVGLILLLVIILVIVIPIITSFSSS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00777 311 SMART SynN_4 38 165 IPR006011 GO:0016020
Pte15g00777 311 Pfam Syntaxin 46 248 IPR006011 GO:0016020
Pte15g00777 311 CDD SynN 43 200 IPR006011 GO:0016020
Pte15g00777 311 CDD SNARE_syntaxin1-like 212 272 - -
Pte15g00777 311 FunFam Syntaxin 132 206 306 - -
Pte15g00777 311 SUPERFAMILY t-snare proteins 42 268 IPR010989 GO:0016020|GO:0016192
Pte15g00777 311 Pfam SNARE domain 250 301 IPR000727 -
Pte15g00777 311 Gene3D - 209 308 - -
Pte15g00777 311 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 40 171 - -
Pte15g00777 311 ProSitePatterns Syntaxin / epimorphin family signature. 219 259 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pte15g00777 311 Gene3D - 43 171 - -
Pte15g00777 311 SMART tSNARE_6 208 275 IPR000727 -
Pte15g00777 311 PANTHER SYNTAXIN 59 299 IPR045242 -
Pte15g00777 311 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 213 275 IPR000727 -
Pte15g00777 311 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00777 Pte-Chr15 5647069 5648458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00777 1 312 SNARE and Associated Proteins AT1G08560 68.025 1.74e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00777 K08486 - qsa:O6P43_006135 519.235