Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00730 ATGGATCATTATAAGGTTTTGGGATTGGGCAGAAACGCAACCAAAGATGAAATCAAGGAAGCCTTTAGAAAATTGGCTTTCAAATTTCATCCTGACAAACATTCACAGTCATCTCAATCCGTCAAAGACAGTGCCACTCTACGATTCAAACAAGTTTCGGAGGCATACGAGGTTCTCAGTGATGATCGCAAACGTGCCGATTATAATATCAGGTCAAGGACGAGCGGGAACAGTGGGTATCAGTATCAGCATTATTACCAAAATAGTCGTAGGGGACATGGGAATTTTTATAATTCTAGTTATAGACCTGGGTCAGGCTCCACTAGCTACGGGTTTATCTCCAAGCTCGAGAATTTACTTCTGTTCCTCACAACCAGAGCGTTTCTTCTCAACTTGGCCTTTGCTGGAGCTTTATTAGGTTCGGCGGTTGCAATCGATGCAAGCCAGGAGGCTATTTGGAAGAAGTACAATTCTGGGAAATCATTTGAGGAAGCCATAGATTCCATCGAAAAAGCTAAAACACGTAGACGGGACGAACGAAAGTAA 546 0.4286 MDHYKVLGLGRNATKDEIKEAFRKLAFKFHPDKHSQSSQSVKDSATLRFKQVSEAYEVLSDDRKRADYNIRSRTSGNSGYQYQHYYQNSRRGHGNFYNSSYRPGSGSTSYGFISKLENLLLFLTTRAFLLNLAFAGALLGSAVAIDASQEAIWKKYNSGKSFEEAIDSIEKAKTRRRDERK* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00730 181 FunFam DnaJ domain protein 1 90 - -
Pte15g00730 181 PANTHER CO-CHAPERONE PROTEIN DJLA 4 108 - -
Pte15g00730 181 CDD DnaJ 2 61 IPR001623 -
Pte15g00730 181 SUPERFAMILY Chaperone J-domain 1 101 IPR036869 -
Pte15g00730 181 Pfam DnaJ domain 2 69 IPR001623 -
Pte15g00730 181 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Pte15g00730 181 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Pte15g00730 181 PRINTS DnaJ domain signature 4 22 IPR001623 -
Pte15g00730 181 PRINTS DnaJ domain signature 44 64 IPR001623 -
Pte15g00730 181 PRINTS DnaJ domain signature 22 37 IPR001623 -
Pte15g00730 181 Gene3D DnaJ domain 1 93 IPR036869 -
Pte15g00730 181 SMART dnaj_3 1 64 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00730 Pte-Chr15 5269424 5271644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00730 3 69 C2H2 Transcription Factor Family AT1G74250 41.791 2.98e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00730 - - qsa:O6P43_006260 223.402