Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00724 ATGTTTCAAGCTAAGAAATTTTCATCTGCAACGTTAGTACCCCACAGAGCTCAAGATGCTGAACAGCTCCCGGACATCGGGGTCTTGAGTAGTTCTGCTGTAAAATCTGTCGTACCCGCTGGTGGAGGCAATGGGAAACAGCGGTTAAGATGGACTTCAGATCTTCATAACCGTTTCGTGGATGCGATTGCACAGCTTGGTGGACCAGATAGGGCAACTCCAAAAGGCGTCCTCAGAGTAATGGGTGTACCTGGACTTACCATTTATCATGTGAAAAGTCATTTACAGAAGTATCGCCTAGCCAAGTATCTGCCTGATTCGGCTAATGAGGGTAAAGGCTTAAGTGATGAGAAAAAGAATACTGGAGACAGTGCATCTGGAACAGATTCTTCTCCGAAGTTGGTGTTTGCTCTTATTACTGGCATTGCTTTGAAATCCTCTGACATTTTACCATCGTCGGAGGTCGGAGAAGTCCCTTCTCACTCAGATCCTTCTGGTAATCCATCTGAAAAAGATTTCTGCCCTTTGAAGAAACAAAAGGTTAGTAACAATCTGAAAGAAGGCTGCATTGGATCCCAGGTGCCAATAAAGAGTCCGCAGAATAATATTGATGTCGTGGATGGACAATGGAATACAAACCTATATGGAAGTACTGGGTTTGGATTTAACCTGGGAATGAATTTCAGAGACAAAGAAGACAGCAAAAGAAATTCATGA 717 0.4351 MFQAKKFSSATLVPHRAQDAEQLPDIGVLSSSAVKSVVPAGGGNGKQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPDSANEGKGLSDEKKNTGDSASGTDSSPKLVFALITGIALKSSDILPSSEVGEVPSHSDPSGNPSEKDFCPLKKQKVSNNLKEGCIGSQVPIKSPQNNIDVVDGQWNTNLYGSTGFGFNLGMNFRDKEDSKRNS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00724 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Pte15g00724 238 MobiDBLite consensus disorder prediction 109 129 - -
Pte15g00724 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 126 IPR044848 GO:0003700
Pte15g00724 238 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Pte15g00724 238 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Pte15g00724 238 SUPERFAMILY Homeodomain-like 46 100 IPR009057 -
Pte15g00724 238 Gene3D - 45 104 - -
Pte15g00724 238 MobiDBLite consensus disorder prediction 153 174 - -
Pte15g00724 238 FunFam Myb family transcription factor 45 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00724 Pte-Chr15 5232126 5234607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00724 39 145 G2-like Transcription Factor Family AT3G13040 46.729 9.11e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g00724 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00724 - - qsa:O6P43_009965 244.973