Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00718 ATGGCAAGGATCCGCTTGCTCGTGTCGGATTTTGCGATGTCTGCCATGTGGGTATGGTCTGGGGTTGTGGTGAAGATGTTCGTGTATAAATATTTAGCCTTGAGTAATCAGCTTGTTGCAGAGGTTGTCGTGTCTGCGCTATTGATTGTCAACATGTTTTTTTTTGCATTTCTGGGCGACATCACCAAAGGTGGAGCTTATAATCCTCTTACTGTGTTTGGTGGTGCCATTACTGGGGATTTTAGCCACTTCCTCTTTACTGTTGGTGCTAGGATCCCAACTCAGGTGGCTGGATCTATTACTGGGGTGAGATATCTTATTGAGACCTTCCCTGACATAAGACGTGGGCCACGTTTGAATGTTGACATTCATAGAGGTGCGCTCACTGAAGGACTACTAACATTTGGAGTTGTCACTACATCGCTTATGCTCTCCAGAAAAATTCCTGGAAACTCTCACATGAAGACTTGGATCTCTAGTGTCTCCAAGTTAACCTTGCATATCCTTGGCTCTGATCTTACGGGTGGTTGTATGAACCCAGCTTCAGTGATGGGATGGGCTTACGCTAGAGGTGATCACATAACAAAGGAGCATATTTTTGTATATTGGCTTGGCCCCGTAAAAGCAACTCTATTGGCAGTCTTGATGTTTAAGTTGGTATTTCGACCTGTAAAGGATGAGAAAAGCACAAAAAGTAAATCAGAATGA 708 0.4393 MARIRLLVSDFAMSAMWVWSGVVVKMFVYKYLALSNQLVAEVVVSALLIVNMFFFAFLGDITKGGAYNPLTVFGGAITGDFSHFLFTVGARIPTQVAGSITGVRYLIETFPDIRRGPRLNVDIHRGALTEGLLTFGVVTTSLMLSRKIPGNSHMKTWISSVSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHIFVYWLGPVKATLLAVLMFKLVFRPVKDEKSTKSKSE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00718 235 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00718 235 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00718 235 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00718 235 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00718 235 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00718 235 Pfam Major intrinsic protein 4 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00718 235 SUPERFAMILY Aquaporin-like 4 227 IPR023271 -
Pte15g00718 235 PANTHER AQUAPORIN SIP2-1-RELATED 1 234 IPR044226 GO:0015267
Pte15g00718 235 Gene3D Glycerol uptake facilitator protein. 2 235 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00718 Pte-Chr15 5197031 5200010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00718 1 235 Major Intrinsic Protein MIP AT3G56950 58.650 6.36e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00718 K09875 - qsa:O6P43_009984 347.436