Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00717 ATGGATCAGGATAATGGTCAGGACTCTGTTCCTGAATCTGGGTCAGTTGACAAGTCCAGGGTTTTGGATGTCAAGCCTTTGCGATGTCTTGACCCTGTCTTTCCATCAGCACCTTCTAGTATACCATCAACACCCCAAGGTGGTCCTCCCTTTGTTTGTGTGGGACCGTTTGGTCCTTTTCCTCCCGGGTTTATCCCCTTCTATCCATTTTTTGATCCCAACACTCCCATACCTCCTGCCGTTCCTATCAATTCTTTTAGGTCACCAGCAGCTAGAAGAAAGGGAATTGCAGGGTCATCAAGAAGTACAGAAGGTACATCTAGCTTGGACAGGCGAAAGAGCAAGTCTCAGAAGAAGATGAGGAGGGTGCAGGACCCTAATTTTGAGTCATCTGAAGTTGATGGGGATGCAGTGGCTAATGATATTCTTGAACCTGTTAATCACGTTGTTTATGACGTGTTGAAACAAGGTGATGGTCAGAAGGAGGCTGTTGCTTGCACGCTTATGATTTTTGAGTTGCTAAGGAGGAGGATCACGCAAATTGAAGAGACGAAGGAAGCAACTTCTGGAGTAACACGAAGGCCGGATTTAAAAGCAGGTACAACTTTAATGAAGAGAGGGATTCGTGCAAACATGACAAGGCGAATTGGAAATGTTCCTGGTGTTGAAGTTGGGGATATCTTCTTTTTCAGGTTTGAATTATGTTTGGTGGGATTACATGCTCCGTCCATGGCAGGAATTGATTTCCTTTCTGTCAGATTCAGTCAGGAAGATGAACCCTTGGCAGTAAGCATTGTCTCATCTGGAGGATATGAGGACAACATGGAGGATCCAGAGGTGTTGATTTATACTGGCCAAGGTGGGGTTAGCAGCAAAGACAAAGAAGGGAAGGATCAGAAACTTGAAAGAGGAAACCTAGCATTGGAGAAAAGCCTGCATAAAGGGAATGATGTTAGAGTAATTCGGGGCGTAAAGGATGTTGCAAATCCAAATGGGAAGATATATGTCTATGATGGTCTTTATAAAATCCAGGAATTTTGGTTGGAAAAATCAAAGTCCGGTTACAATGTATTCAAATATAAATTAGTTAGGGTACCTGGTCAGCCTGAAGCTTATATGACATGGAAATCAATTCAGCAATGGAGCGAGAAATCTTCTCTGAGGATGGGAGTTATTTTGCCTGATCTAACTTCTGGGGCAGAAACTTTGCCCGTTTGTCTTGTGAATGATGTTGATAATGAGAAAGGCCCTTCATACTTTACTTATTTTCCTGGTCTCAAGTATTCTAAGACAGTGAATCCTATTGGACCTTCTAATGGGTGTGTCTGCTCAGGTGGTTGTCAACCTAATAATTCAAACTGCCCCTGCATCCAAAAGAATGGAGGGTTTCTCCCATGTGCTGCTAATGGAGTTCTCGTGAATTTAAAATCCTTGATATATGAGTGTGGTCCCTCCTGTCAATGCCCACCTAAGTGCCGAAATCGGGTGTCTCAAAGTGGTCTTAAAATTCGTCTTGAGGTTTTCAAAACTAAGGAAAAAGGTTGGGGTCTGAGGTCTTGGGATCCAATCCGTGCTGGGACTTTTATTTGTGAATATGCTGGGATAGTGATTGATAAAGAGGAGGTTCATGAAAGTGATGATTATGTTTTTGATTCCACCCGAACTTACCCACAGCCAGAACTTCTCCCAGAAGACTCTGGCCCAGTGAAGATCCCGTTTCCCTTGCTTGTTACTGCGAAAAAAGTTGGCAATGTGGCTCGTTTTATGAATCATAGCTGTTCCCCAAATACATTTTGGCGTCCAGTCTTGCGTGAAAATAGCAATGAAGGTGACCTACACATTGCATTTTTTGCAAACAGACACATTCCTCCTATGTCAGAGTTGACGTATGATTATGGAATGGTCGCGCCTCTTCAAGCACGGCTGAAGAAGAAGAAATGCCTGTGTGGTTCAGTCAAATGCAAGGGTTTCTTTTATTAA 1980 0.4328 MDQDNGQDSVPESGSVDKSRVLDVKPLRCLDPVFPSAPSSIPSTPQGGPPFVCVGPFGPFPPGFIPFYPFFDPNTPIPPAVPINSFRSPAARRKGIAGSSRSTEGTSSLDRRKSKSQKKMRRVQDPNFESSEVDGDAVANDILEPVNHVVYDVLKQGDGQKEAVACTLMIFELLRRRITQIEETKEATSGVTRRPDLKAGTTLMKRGIRANMTRRIGNVPGVEVGDIFFFRFELCLVGLHAPSMAGIDFLSVRFSQEDEPLAVSIVSSGGYEDNMEDPEVLIYTGQGGVSSKDKEGKDQKLERGNLALEKSLHKGNDVRVIRGVKDVANPNGKIYVYDGLYKIQEFWLEKSKSGYNVFKYKLVRVPGQPEAYMTWKSIQQWSEKSSLRMGVILPDLTSGAETLPVCLVNDVDNEKGPSYFTYFPGLKYSKTVNPIGPSNGCVCSGGCQPNNSNCPCIQKNGGFLPCAANGVLVNLKSLIYECGPSCQCPPKCRNRVSQSGLKIRLEVFKTKEKGWGLRSWDPIRAGTFICEYAGIVIDKEEVHESDDYVFDSTRTYPQPELLPEDSGPVKIPFPLLVTAKKVGNVARFMNHSCSPNTFWRPVLRENSNEGDLHIAFFANRHIPPMSELTYDYGMVAPLQARLKKKKCLCGSVKCKGFFY* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00717 659 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 200 383 - -
Pte15g00717 659 ProSiteProfiles Post-SET domain profile. 643 659 IPR003616 -
Pte15g00717 659 SUPERFAMILY SET domain 403 656 IPR046341 -
Pte15g00717 659 ProSiteProfiles Pre-SET domain profile. 439 500 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte15g00717 659 SMART G9a_1 212 368 IPR003105 -
Pte15g00717 659 Pfam SET domain 514 633 IPR001214 GO:0005515
Pte15g00717 659 MobiDBLite consensus disorder prediction 82 133 - -
Pte15g00717 659 MobiDBLite consensus disorder prediction 1 21 - -
Pte15g00717 659 SUPERFAMILY PUA domain-like 199 384 IPR015947 -
Pte15g00717 659 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 104 652 - -
Pte15g00717 659 Gene3D SET domain 389 659 IPR046341 -
Pte15g00717 659 Gene3D - 200 388 IPR036987 -
Pte15g00717 659 ProSiteProfiles YDG domain profile. 217 364 IPR003105 -
Pte15g00717 659 Pfam SAD/SRA domain 216 368 IPR003105 -
Pte15g00717 659 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 73 659 IPR025794 GO:0016571
Pte15g00717 659 SMART set_7 503 639 IPR001214 GO:0005515
Pte15g00717 659 ProSiteProfiles SET domain profile. 503 633 IPR001214 GO:0005515
Pte15g00717 659 SMART preset_2 393 487 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte15g00717 659 Pfam Pre-SET motif 397 495 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00717 Pte-Chr15 5193354 5196664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00717 6 658 Su(var)3-9 homologs AT1G73100 50.509 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte15g00717 SAD_SRA 2.9e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00717 K24405 - vvi:100263685 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00717 15 5193354 5196664 Pte15g00717 15 5193354 5196664 RCT