Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00716 ATGGCAGAACTCCAAGAACCGCTTTTGCACAGTCGAGATTCTGAAGAAGATGATGGTAGTTACGCAGTGAATGCTTTTCGAACGTGTTCAATGCTCCCCGGTTCGACAGCGAGTCACAGTTTCACTCCACCGCTTACTCGATACACAACCCGTCTGATCAACTCTGGCCCTTACCCCCATCGAATTCTCATGGGAGACATCTCTCAACTCCGATCGGATGGAAGTGATAATAATGCCAGTGCAAATGGTGCTTATGCGAAACCCATTTTGGTTTTGGACCTTGTCTGGTTGTTGGCTTTCGTTTTGGTCTGCGCTGGCGTGCTTCTGTCCTCTTCCGGTGTAGGCCCTTCAACACCTTTGAGGCTTTGGCTTTGTGGCTATGCGATTCACTCTATTTCTCATATGGGTATTGTGTGCTTTGAATATAAAATGAAAAGTCATCTGTCTCAACTTGCAGAGAATAGTCGTCCATTACCTCAGAATCGAAGCAGAGTTGTAAAAAGGTTCAAGTCTGTGAGCACTTTTGTTTCCTCAGTTTGGTGGGTCTTTGGATTCTATTGGATTGTTATTGGTGGGCGAGAACTTCTACAAGACTGTCCTCGCCTTTATTGGATAACAGTTGTCTTCCTCGCATTTGACGTGTTCTTTATCATCTTTTGTGTTGTGCTGGCATGCATAGCTCTTTCCTGTATTGTCCCTTTTCTACTATTATCTGTTGCTATGAGAATGGGGGAAGGTGCATCCCTTGAGGAAATCAGTTCTCTTCCAAAGTATGTTTTTCACCGGTCAAATACATTGGTCATTCATGATATTAATAAGAAGCAAGCTTCCTCTGCTGAAATGAACTCTAGCAACTATGTTGATGAACTCCCTCTTCAACCGGAGGATTCTGACTGTTGTATATGCCTTTCCCGATACATGGATGGAGCAGAGCTGTATCGCCTTCCTTGCAACCATCACTTTCATTGTGGATGCATCAGCAGGTGGCTTCAAATAAAGGCAACATGCCCCCTTTGTAAATCTAGCATTCATGGGGGTGATACATTGGTTTGA 1053 0.4435 MAELQEPLLHSRDSEEDDGSYAVNAFRTCSMLPGSTASHSFTPPLTRYTTRLINSGPYPHRILMGDISQLRSDGSDNNASANGAYAKPILVLDLVWLLAFVLVCAGVLLSSSGVGPSTPLRLWLCGYAIHSISHMGIVCFEYKMKSHLSQLAENSRPLPQNRSRVVKRFKSVSTFVSSVWWVFGFYWIVIGGRELLQDCPRLYWITVVFLAFDVFFIIFCVVLACIALSCIVPFLLLSVAMRMGEGASLEEISSLPKYVFHRSNTLVIHDINKKQASSAEMNSSNYVDELPLQPEDSDCCICLSRYMDGAELYRLPCNHHFHCGCISRWLQIKATCPLCKSSIHGGDTLV* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00716 350 Pfam Ring finger domain 298 340 IPR001841 -
Pte15g00716 350 PANTHER TARGET OF ERK KINASE MPK-1 82 344 - -
Pte15g00716 350 SMART ring_2 299 339 IPR001841 -
Pte15g00716 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 345 IPR013083 -
Pte15g00716 350 ProSiteProfiles Zinc finger RING-type profile. 299 340 IPR001841 -
Pte15g00716 350 SUPERFAMILY RING/U-box 292 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00716 Pte-Chr15 5184418 5188982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00716 81 347 C3H Transcription Factor Family AT1G68070 45.196 1.78e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00716 - - pcin:129306192 353.599