Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00696 ATGGCGACAAGAGAAGCGATTCCTCAACAACAGCAACACCAAGGGGGTGAAGCAGCAGTTGGAGATGGTAAGCAGTCAAAGAATATTGGTGGGGCTCAGCACAGGAATCGCAGAGCACTAGGAGATATCGGGAATTTGGTGACTGTAAGAGAAGTTGAAGCCAAGGCTAATCGACCCATCACAAGAAATTTCCAGGCACAACTTCTTGCAAACGCACAAGCTGCACCAGCTGTCGACAAGAGCAAGAAGCAGCTTTGTCCCAACCTGAATGTTACTGCTACTTTAGGAGCTCCTGCTCCTGTCGATGGAATTAATAAAAAAGAAGCGGCACCAAAGGTCATTAAAAAGAAACCTACAGTGAAGCCAAAACCAGTGAAAGACGTACTGACTGCCAGGAGCAAGGCTGCATGTGGACTGAACACTAAACCGAAGGAAAAGATTGTTAATATTGATGCAGCTGATGCTGGTAATGAGTTGGCTGCTGTGGAATATGTTGAAGACCTTTACAAGTTCTACAAGTTGGCTGAGAATGAAAACCGTCCTCGGGATTACATGGACTCGCAGCCTGAGGTCAACAGCAAGATGAGAGCAATTCTTGTCGATTGGCTGATTGATGTGCATAGCAAATTCAAACTTTCAAATGAGACCCTTTATTTGACCATCAACATTGTAGATAGGTTCCTTGGACTTAAGACAGTGCCAAGGAAGGAGCTACAACTGGTCGGCATCGGTGCAATGTTGATAGCCTCTAAGTATGAAGAAATCTGGCCTCCTGAGGTTAATGATTTTATGTGCCTCTCAGACAGAGCTTACTCTCATGAACAGATACTGCGTATGGAGAAAGTCATACTAGGCACAGTTGAATGGACTTTAACCGTGCCCACCCCTTATGTTTTCCTTATTCGTTTCATCAAGGCCTCTATTCCTGATCAACTATTGGAAAATATGGTCCATTTTCTTTCTGAACTGGGAATGATACAATATGCAACCACAGTGCACTATCCATCATTGGTTGCTGCCTCAGCAGTCTTCGCTGCTCGGTGCACCTTGAACCAAAGTCCTGCTTGGAACGAGACACTCAAGCTTCGCACTGGTTACTCAGAAGAGCAGCTTATGTAA 1119 0.4504 MATREAIPQQQQHQGGEAAVGDGKQSKNIGGAQHRNRRALGDIGNLVTVREVEAKANRPITRNFQAQLLANAQAAPAVDKSKKQLCPNLNVTATLGAPAPVDGINKKEAAPKVIKKKPTVKPKPVKDVLTARSKAACGLNTKPKEKIVNIDAADAGNELAAVEYVEDLYKFYKLAENENRPRDYMDSQPEVNSKMRAILVDWLIDVHSKFKLSNETLYLTINIVDRFLGLKTVPRKELQLVGIGAMLIASKYEEIWPPEVNDFMCLSDRAYSHEQILRMEKVILGTVEWTLTVPTPYVFLIRFIKASIPDQLLENMVHFLSELGMIQYATTVHYPSLVAASAVFAARCTLNQSPAWNETLKLRTGYSEEQLM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00696 372 PIRSF Cyclin_A_B_D_E 1 372 IPR046965 GO:0016538|GO:0044772
Pte15g00696 372 SMART cyclin_7 298 372 IPR013763 -
Pte15g00696 372 SMART cyclin_7 201 285 IPR013763 -
Pte15g00696 372 Pfam Cyclin, C-terminal domain 294 372 IPR004367 -
Pte15g00696 372 SUPERFAMILY Cyclin-like 293 372 IPR036915 -
Pte15g00696 372 MobiDBLite consensus disorder prediction 1 39 - -
Pte15g00696 372 Gene3D - 167 371 - -
Pte15g00696 372 FunFam G2/mitotic-specific cyclin 180 292 - -
Pte15g00696 372 SUPERFAMILY Cyclin-like 157 291 IPR036915 -
Pte15g00696 372 PANTHER CYCLINS 123 357 IPR039361 -
Pte15g00696 372 MobiDBLite consensus disorder prediction 1 16 - -
Pte15g00696 372 Pfam Cyclin, N-terminal domain 168 291 IPR006671 -
Pte15g00696 372 CDD CYCLIN_AtCycB-like_rpt1 144 289 - -
Pte15g00696 372 ProSitePatterns Cyclins signature. 196 227 IPR006671 -
Pte15g00696 372 Gene3D - 181 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00696 Pte-Chr15 5077532 5084439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00696 21 372 Core Cell Cycle Gene Families AT3G11520 54.521 4.91e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00696 K21777 - gmx:547919 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00696 15 5077532 5084439 Pte15g00696 15 5077532 5084439 RCT