Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00694 ATGGCGTTGAAGTCAGGGTCACTGAATTACTGGAGAGATTATTTCAGTACTGCAAGTTATGACATACTTGATATAATTGAGCATGCGATTAGGGTGGCTGCTTCTGATTGTCCAAAAAAATTCAGAATGCAGCGGGATCGAATTGCAGAGCTACTTTTCTCGGCTAAATTGACTCATTGTTCTGGTTGTGACCGACTTCAGTTGGCGGTGCCTGCTGACGATGAAGAAGAAGAAGATGATGGAGGTTGTAAAAGTGGTTTGGATAGAGATGGTGGTGAGATTGAGGCTGGTGCTAGTAAAGAGAGCAAGGCCAATAGTAGCAGAGATGATTATGGAGACATCAATATGAACCAAGGTTTGAGCGATATTAGCTATAGACAAGCTGAGGCATTGACTGCTGAGATTGAAGAAGAGTCTCAGATTGTTGGGGAGGTTTTGAGAATCAAAGAGATTCTATGCAATAGTGAAGAACAGTCTCATTCGATAATATTTGAATCATTGAGGAGGCTCCAGTTGATGGCTCTGACCGTGGATATTCTGCAGGCAACTGAGATTGGGAAGATTGTCTCTGGTCTTCGCAAGCATAGGTCCAAGGACATACGAAGTCTTTCGAAGACACTCTACATTGGGTGGAAAGAATTGGCGGAGGAGTGGCTCAAAGCTACAACAACGGTTGCAGCTTCAGAAGGCACTCCAGATTCTGTCAACCCATCCTTGGTGGATGAGGAAGAAGGGCTTCCTTCACCTCCTATGGATGAAGCCTTCTTTGCCACTCAAACAGGTGCAATCGACATCTCACAGTTCTTTGATGGCATGGATGATGATGGAAATCCCGGAAACAGCAGCGAACACATCAGGAACCGTGAAAATGGAAGAAAACCAGCACTTGATTGTCAAAACGTGATAAAGAAGAAACAGCAATGTTCCGGTGAAGCAAATGTTGCTGTAAATGACAACAAAAGTCATCAAATAAAGAAACAGGAGCTTGGTGCTAACCTAAACAAAGAGTCAACTTCTCCATTGAGACAAGAAAAATTGTCTAATGCTGATTCAGGACCAGGAAGACCACGAAAGTTGGTTCAAGAGCAAAAGCAGAGTTGTGATATCAGTATCCGGAAAAGGGTAGATAAGACTGACATCCAAAGCACGCCTATGTCTGTTCAGCAAGATGCGTCTAAATGCTCTAAGGAAGACGCAGTGCAAATGAAACTAGAAGCGACAAAGCGAAAACTTCAAGAGAATTATCAACAAGTTGAGAAGGGTATGTTCCTCTTTTTCCAAATTTATAACCAGTTTGTCTCCTATGGAGTGAAATGTTGA 1320 0.4288 MALKSGSLNYWRDYFSTASYDILDIIEHAIRVAASDCPKKFRMQRDRIAELLFSAKLTHCSGCDRLQLAVPADDEEEEDDGGCKSGLDRDGGEIEAGASKESKANSSRDDYGDINMNQGLSDISYRQAEALTAEIEEESQIVGEVLRIKEILCNSEEQSHSIIFESLRRLQLMALTVDILQATEIGKIVSGLRKHRSKDIRSLSKTLYIGWKELAEEWLKATTTVAASEGTPDSVNPSLVDEEEGLPSPPMDEAFFATQTGAIDISQFFDGMDDDGNPGNSSEHIRNRENGRKPALDCQNVIKKKQQCSGEANVAVNDNKSHQIKKQELGANLNKESTSPLRQEKLSNADSGPGRPRKLVQEQKQSCDISIRKRVDKTDIQSTPMSVQQDASKCSKEDAVQMKLEATKRKLQENYQQVEKGMFLFFQIYNQFVSYGVKC* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00694 439 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 140 226 IPR035441 -
Pte15g00694 439 Pfam TFIIS helical bundle-like domain 167 213 IPR017923 -
Pte15g00694 439 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 228 IPR035441 -
Pte15g00694 439 MobiDBLite consensus disorder prediction 277 293 - -
Pte15g00694 439 CDD TFIIS_I 144 216 - -
Pte15g00694 439 MobiDBLite consensus disorder prediction 82 108 - -
Pte15g00694 439 MobiDBLite consensus disorder prediction 268 294 - -
Pte15g00694 439 Coils Coil 401 421 - -
Pte15g00694 439 MobiDBLite consensus disorder prediction 71 111 - -
Pte15g00694 439 MobiDBLite consensus disorder prediction 227 248 - -
Pte15g00694 439 MobiDBLite consensus disorder prediction 333 366 - -
Pte15g00694 439 SMART TFS2_5 142 217 IPR003617 GO:0005634
Pte15g00694 439 ProSiteProfiles TFIIS N-terminal domain profile. 143 218 IPR017923 -
Pte15g00694 439 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 7 420 IPR044805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00694 Pte-Chr15 5067034 5070495 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pte15g00694 Med26 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00694 - - jre:109015183 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00694 15 5067034 5070495 Pte15g00694 15 5067034 5070495 RCT