Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00689 ATGTCATCGTCTCAGGGTTCAAGCTCTTGGTCGGCCAAGGAAAATAAAATCTTTGAAAATGCTCTGGCTACTTTTGACAAGGACACCCAGGACCGCTTCGACAACGTTGCCAAGGCTGTGGGTACCAAAACTGTCGAACAAGTTAAGAGGCATTATGATCGTCTTTTAAAGGATGTCCGTGACATAGAGTCCGGTCGATTTCCCCTCCCTCATTACGATCCAATTATAGAAAGTAATCCAAGGAACACGGACGAGGATCAGCAACAGAGGTATTATACAATAATGTAG 288 0.4444 MSSSQGSSSWSAKENKIFENALATFDKDTQDRFDNVAKAVGTKTVEQVKRHYDRLLKDVRDIESGRFPLPHYDPIIESNPRNTDEDQQQRYYTIM* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00689 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 88 IPR044636 GO:0003700
Pte15g00689 95 Gene3D - 1 69 - -
Pte15g00689 95 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
Pte15g00689 95 SMART sant 6 58 IPR001005 -
Pte15g00689 95 FunFam Transcription factor SRM1 2 69 - -
Pte15g00689 95 ProSiteProfiles SANT domain profile. 5 60 IPR017884 -
Pte15g00689 95 MobiDBLite consensus disorder prediction 68 87 - -
Pte15g00689 95 CDD SANT 14 56 IPR001005 -
Pte15g00689 95 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00689 Pte-Chr15 5054871 5055158 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g00689 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00689 - - mnt:21401518 104.76