Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00687 ATGTATGAACATCTTGCAGTCTTCATTTATATATATATAAAAGGTGAGACAACCACCGAAAGCTCCCAACACTTTCATTTCACAAAGGTGAGAAGAGTCTTTCAGTCAAAAAGCTCAATCATCATCATAATTCAGAAACCTCCATTAACAAAGCAGTCACAAGAAACAGCTAGCCTCATTACCAAGCAAGCGCAGCGCACCATACCTCAGCCACTCTACTCGCCCCTATACATCATGCAGCCCGATAACTCAGAGCTTTACCGATTCCTCGCTGCAAATGGTTCTTTTTTCAATCTTGCAGCAAGGCCATACAACTTGCCAGCAACGGCAGCCACTGCCACAGCCACCAATACTATGCAAAGCTTTTGTAGTTCCTCATACTACCCTCTTGATGTTTCAGAACTTACTGATGCCACACCGCAAGATCGAGCCCTTGCTGCCTTAAAGAATCACAAAGAGGCCGAGAAGAGAAGAAGAGAAAGAATTAACTCCCACCTTGACAAGCTTCGAACTCTTCTTCCATGTAACTCAAAGACAGACAAAGCTTCTCTTCTTGCAAAGGTTGTCCAGAGAGTGAGAGAGCTCAAGCAGCAAACTGCTGAAATCACCGGGCTCGAGACATTTCCATCTGAGACTGATGAGATCACCGTTCTCTCCACCCACGGAGACTACCCAAATGACGGTCAGCTCATCTTTAAAGCGTCTTTATGCTGTGAAGACCGTTCGGACCTTATACCTGACTTAATCGAAATCCTCAAATCTCTCCATCTCAAAACCCTCAAGGCAGAAATGGCGACACTTGGTGGAAGAATGCGTAATGTTCTCATTGTTGCTGCAGATAAAGAACACAGTATTGAATCCATCCATTTCTTGCAGAATGCTTTGAAATCCTTGCTAGAACGTTCAAATTCTACTGACAGGTCCAAGCGGAGAAGGGTTTTAGATCATAAAATAATTGTCTAA 963 0.4372 MYEHLAVFIYIYIKGETTTESSQHFHFTKVRRVFQSKSSIIIIIQKPPLTKQSQETASLITKQAQRTIPQPLYSPLYIMQPDNSELYRFLAANGSFFNLAARPYNLPATAATATATNTMQSFCSSSYYPLDVSELTDATPQDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQTAEITGLETFPSETDEITVLSTHGDYPNDGQLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRMRNVLIVAADKEHSIESIHFLQNALKSLLERSNSTDRSKRRRVLDHKIIV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00687 320 Pfam Helix-loop-helix DNA-binding domain 150 195 IPR011598 GO:0046983
Pte15g00687 320 Gene3D - 141 204 IPR036638 GO:0046983
Pte15g00687 320 SMART finulus 152 201 IPR011598 GO:0046983
Pte15g00687 320 CDD bHLH_AtAIG1_like 141 217 - -
Pte15g00687 320 FunFam transcription factor bHLH30 141 204 - -
Pte15g00687 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 204 IPR036638 GO:0046983
Pte15g00687 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Pte15g00687 320 PANTHER TRANSCRIPTION FACTOR BHLH30 72 316 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00687 Pte-Chr15 5031783 5034312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00687 79 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 63.713 2.64e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g00687 HLH 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00687 - - pvy:116124749 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00687 15 5031783 5034312 Pte15g00687 15 5031783 5034312 RCT