Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00676 ATGGGCATGGCCACTGAGTCCCAGTTTCATGTTTTGGCTGTTGATGACAGCATCATAGACAGGAGGCTCATTGAGAGGCTTCTGAAAACTTCTTCATACCAAGTTACTACAGTTGATTCCGGCAGTAAGGCTTTAGAGTTTCTGGGATTGCACAGGAACGAACAAACCGACCCGAATATACCTTCCGTTTCTCCAAATAACCATCCGGAAGTGGAGGTAAATCTCATCATTACTGACTACTGCATGCCTGGAATGACAGGGTATGACTTGCTCAAGAAGGTTAAGGAATCCTCATGTTTTAGGAACATCCCAGTTGTGATTATGTCATCTGAGCACGAACCATCAAGGATTACAAGATGTTTAGAGGAAGGAGCTGAAGAATTTTTCTTAAAACCCGTAAGCGCTTCGGACGTGCGCAAGCTTAAAACTCACATGATGAAGTCCAAGCTTAAAAATCAAAACCAGGAAAGCCATGAAAGGCTTGATGAACTACTGGATATCAAGAATTTTGCATTACAGGAACAGAAACAAACACCACCACGATTAGTGCTACAAGAAAAGCAGCAAGAACTGTTAGCATTACAAGGACTGCACCAGCAACAGTCAGTGTTGCTAGAACTGCAAGAACCACATCACTCAATGCTGCTTGAAAGCCAACAACAACTTCCAACACAACAACAGTCAGTCATTCAAGAACAGATGCAATCCATTTCACAACCCAACAATAACAAGAGGAAATCCATGGATGAAGGACTTCCATCGGATAGCACAAGACCGAGGTATGACGGAATCACCACTATGGTTTGA 807 0.43 MGMATESQFHVLAVDDSIIDRRLIERLLKTSSYQVTTVDSGSKALEFLGLHRNEQTDPNIPSVSPNNHPEVEVNLIITDYCMPGMTGYDLLKKVKESSCFRNIPVVIMSSEHEPSRITRCLEEGAEEFFLKPVSASDVRKLKTHMMKSKLKNQNQESHERLDELLDIKNFALQEQKQTPPRLVLQEKQQELLALQGLHQQQSVLLELQEPHHSMLLESQQQLPTQQQSVIQEQMQSISQPNNNKRKSMDEGLPSDSTRPRYDGITTMV* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00676 268 CDD REC_typeA_ARR 11 141 - -
Pte15g00676 268 SUPERFAMILY CheY-like 8 154 IPR011006 -
Pte15g00676 268 Coils Coil 147 167 - -
Pte15g00676 268 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Pte15g00676 268 MobiDBLite consensus disorder prediction 219 268 - -
Pte15g00676 268 MobiDBLite consensus disorder prediction 219 247 - -
Pte15g00676 268 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 236 IPR045279 GO:0009736
Pte15g00676 268 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Pte15g00676 268 SMART REC_2 9 142 IPR001789 GO:0000160
Pte15g00676 268 Gene3D - 10 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00676 Pte-Chr15 4955207 4957563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00676 1 269 Response Regulator Gene Family AT3G57040 55.185 6.85e-90 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte15g00676 Response_reg 2.3e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00676 K14492 - qsa:O6P43_006390 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00676 15 4955207 4957563 Pte15g00676 15 4955207 4957563 RCT