Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00639 ATGGGCAATTGTTGTGTGACCCCAAACGTTTCAAAGGAGAAGAAAAAGGGCAAGAGGAAAAACAAGCAAAACCCGTTTTCACTCAATTATTATTCTCAAATCGATGGAAACGGTGGTAAGAAGCTTGTTGTATTGAAGGAGCCAACAGGACGTGAAATTCAGCTGAAATATGAATTAGGTAACGAGCTTGGTAGAGGAGAATTTGGGGTTACCTATTTGTGTACAGATAAAATTACAGGTGAGAAGTTAGCATGCAAATCGATCTCAAAGAAGAAGCTAAGGACAGCTGTGGACATAGACGATGTTAAGAGAGAGGTGGAGATCATGAAGCGTTTGCCCGAACACCCTAATATTGTGAGCTTGAAGGACACGTATGAAGATGACAATGCCGTTCACCTTGTGATGGAATTGTGTGAGGGTGGAGAATTGTTTGATCGGATCGTTTCTCGTGGACATTATACAGAACGTGCTGCTGCTGTTGTTACAAAGACGATTGTGGAAGTAGTGCAGATGTGCCACAAGCATGGTGTCATGCATCGGGATCTCAAACCTGAGAACTTTTTGTTTGCAAACAAGAAGGAAACATCTCCTTTAAAGGCAATAGATTTTGGGTTGTCTATTTTTTTTAAACCTGGTGAAATATTCAATGAAATAGTTGGGAGTCCATATTACATGGCTCCTGAAGTGCTGAGAAGGAGCTATGGCCCAGAAGTTGATATCTGGAGTGCTGGTGTAATTCTGTACATACTACTTTGTGGTGTACCGCCTTTTTGGGCAGAAACTGAACAGGGAATTGCACAAGCAATCATAAGGTCTGTCGTTGATTTTAGAAGAGATCCTTGGCCAAGAATTTCTGATAATGCCAAAGATCTTGTGAAAAAAATGCTTGATCCTGATCCAAAGAGGAGGTTAACAGCTCAAGAAGTGCTAGATCATCCTTGGTTACAAAATGCAAAAAAAGCTCCAAATGTTTCATTAGGTGAAACTGTTAGGGCGAGACTCAAGCAGTTCTCTGTGATGAACAAACTTAAGAAAAGAGCTCTCAGGGTAATTGCAGAGCACTTGTCAGTAGAAGAAGCTGCTGGAATTAAGGAAGGATTCCAGATTATGGACACAGGTAATAAAGGAAAGATTGACATTGACGAATTGAGAATAGGACTGCAGAAACTCGGTCATCAAATGGGTGATGGAGACGTTCAAGTTCTAATGGAAGCTGGTGATGCAGACAAGGACGGGTATCTTGATTATGGAGAATTCGTAGCAATTTCTGTTCACCTTAGAAAGATGGGCAACGATGAGCATCTTCGCAAAGCGTTTCAATTCTTTGATCAAAACCAAAGTGGATTTATAGAAATAGAGGAGCTCCGGGATGCATTGTTTGATGAAGTTGATGCAAACAATGAGGAAGTTACCGATGCTATAATGAATGATGTGGACACCGACAAGGACGGACGAATAAGTTATGTGGAATTTGCTGCAATGATGAAGGCTGGCACAGATTGGAGAAAAGCATCAAGGCAGTACTCGCGAGAGCGGTTTACCAGTCTCAGTCTCAATTTGATGAGAAATGGATCGGTGCAATCAAATGATGGGAAATGA 1599 0.414 MGNCCVTPNVSKEKKKGKRKNKQNPFSLNYYSQIDGNGGKKLVVLKEPTGREIQLKYELGNELGRGEFGVTYLCTDKITGEKLACKSISKKKLRTAVDIDDVKREVEIMKRLPEHPNIVSLKDTYEDDNAVHLVMELCEGGELFDRIVSRGHYTERAAAVVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETSPLKAIDFGLSIFFKPGEIFNEIVGSPYYMAPEVLRRSYGPEVDIWSAGVILYILLCGVPPFWAETEQGIAQAIIRSVVDFRRDPWPRISDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEEAAGIKEGFQIMDTGNKGKIDIDELRIGLQKLGHQMGDGDVQVLMEAGDADKDGYLDYGEFVAISVHLRKMGNDEHLRKAFQFFDQNQSGFIEIEELRDALFDEVDANNEEVTDAIMNDVDTDKDGRISYVEFAAMMKAGTDWRKASRQYSRERFTSLSLNLMRNGSVQSNDGK* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00639 532 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00639 532 SMART efh_1 434 462 IPR002048 GO:0005509
Pte15g00639 532 SMART efh_1 398 426 IPR002048 GO:0005509
Pte15g00639 532 SMART efh_1 470 498 IPR002048 GO:0005509
Pte15g00639 532 SMART efh_1 362 390 IPR002048 GO:0005509
Pte15g00639 532 Gene3D Phosphorylase Kinase; domain 1 59 142 - -
Pte15g00639 532 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Pte15g00639 532 Pfam Protein kinase domain 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00639 532 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Pte15g00639 532 Pfam EF-hand domain pair 433 496 IPR002048 GO:0005509
Pte15g00639 532 CDD STKc_CAMK 56 314 - -
Pte15g00639 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pte15g00639 532 FunFam calcium-dependent protein kinase 13 143 323 - -
Pte15g00639 532 Gene3D Transferase(Phosphotransferase) domain 1 143 323 - -
Pte15g00639 532 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Pte15g00639 532 Pfam EF-hand domain pair 375 424 IPR002048 GO:0005509
Pte15g00639 532 FunFam Calcium-dependent protein kinase 1 59 142 - -
Pte15g00639 532 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Pte15g00639 532 SUPERFAMILY Protein kinase-like (PK-like) 56 324 IPR011009 -
Pte15g00639 532 CDD EFh 434 496 IPR002048 GO:0005509
Pte15g00639 532 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Pte15g00639 532 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Pte15g00639 532 FunFam Calcium-dependent protein kinase 7 324 499 - -
Pte15g00639 532 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 488 - -
Pte15g00639 532 SUPERFAMILY EF-hand 344 522 IPR011992 -
Pte15g00639 532 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Pte15g00639 532 Gene3D - 324 498 - -
Pte15g00639 532 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00639 Pte-Chr15 4663032 4666286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00639 1 527 EF-hand Containing Proteins AT5G19450 78.220 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte15g00639 Pkinase 1.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00639 K13412 - tcc:18598981 922.924