Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00630 ATGCTGGAGGCAAATGTACTACCATTGAAGAGGGCTAAGATTGACTCGGATGACGAAAATGTCACTAGGCAATTTCTTGAAAATCAACACGATGCAAGTGGATACGATCTCACAAGTGCAAAAAGGGTTAAGCACTGCGCAAGTTCTGTCATCGAGTCAAAAACAGAGAATGAACCGTACAAAATGAAGCCCTTCAAAAATTCATTTGGAAAACTTAATGCTGCTTGGATCGCAGATTATGGTTCCGAAAAGGATCAAATAGAAACATACAAAGATGGATTGGTCCCTGTGGATGGTTTTGTTCACTCCGATGCCCCGGTGAGGTATTATAAGATCTCTGAGGAAATTATCAACCGCCTGTTACTTCCTTCTCAGACCACTATGATGCTAAGACTTACATCTGGAAATGAAGCTAAAGAAAGCTATGAGGACTGTGTGAGACAGAATGTGACACGGACTTTGCCATTGGATAAACCCCAAAATAATTTGCTATGTGATAATTCCGCATCTAATGTTCATCCAAAAGCCGCATCTTCTGTGGATATTGAGCAGAATAATTTCGGAGATAAAGCTGAATGCGATGTTGACAATTATTGCGAGGACGGTGGATCAAGTGATAGTGATGGGTATAACAATGAAGATAATCATCTTGCAACGAAAAAAGCTGAATTCTTGAGGTCCCAATGTACATCTGGTCATGATTTTTCAGCTAGTAGTGGCTGGTCAGAGCAAAATCTTTGTATGAAGTGCAATAAAGGAGGCCAACTGCTGCTTTGTGCCACCCGTACCTGTCCCTTGGTTGTTCATGAAAATTGTCTGGGCACTTCAGCCAAATCTCATGCCAACGGCAGTGTGTACTGCCCTTTCTGTGTCTATTCTCTTTCTATATCAGAGTATCTCGTAGCCAAGGAGAAAGCTTTGTTGGCAAGAAATGATTTAGCTTCGTTTCTTCACAAGAATATGTGGCATCTGCTTAAGGAAGTAGATTTATTTCGCAGAAAAGCGCATAATTCCCCGGGAGGCAGTCAGCATGAGTCATGTAAGGATGAAAGCAATGAAACTCCACGCTTGCCGCCAAAACGAGGGGGTCCAGAAGATCATATTGGTGGCCATGTGAACGTAGAAGAAGAGACCGGAGTTTACACGAAATTAAATGTTTCAAGTGGTAAAAGGGTTGGAGTTGAATGGGTTCACAAAGAGAATCCTTCTGTGAGACAGCTTGATGAGAAGAGCCAAAGGCCTGTCCGGGATGAGGATGATTCCAATAAGCATTTCCTCGAAAGAGAAAAAGTTGTCTCACCACATCGAGCCCATCTAGAGAAAAAAATGCAGCAAGAATTGTCAAAGACACAGATCATTAATAACTCAAACCAACCTGCATGTGTGCACGATGTTGATTCGGAGGAAATTTTTGAAGACGAAAAGTCAATTAGTACTAGATGTTCCGCAATATGTGAACTAAAGGACACGCACTACTACCAATACCCACCAATCTCTCGATCAAGGAGAAGGAAGAAGCTTCCTTGGACAGCTGAGGAGGAGGAGATACTTAAGGTGGGATTTCAGAAATTTGCTGGTGACCATGAAAGAGGTGTTCCCTGGAAGAAGATTTTTGAATTCGGTGGCAACGTGTTCTGTAGTGGTCGTACCCCTACTGATCTGAAAGATAAATGGAGGAATATCTGCAAATCAAGCTCAAAATCGAAATGA 1710 0.4216 MLEANVLPLKRAKIDSDDENVTRQFLENQHDASGYDLTSAKRVKHCASSVIESKTENEPYKMKPFKNSFGKLNAAWIADYGSEKDQIETYKDGLVPVDGFVHSDAPVRYYKISEEIINRLLLPSQTTMMLRLTSGNEAKESYEDCVRQNVTRTLPLDKPQNNLLCDNSASNVHPKAASSVDIEQNNFGDKAECDVDNYCEDGGSSDSDGYNNEDNHLATKKAEFLRSQCTSGHDFSASSGWSEQNLCMKCNKGGQLLLCATRTCPLVVHENCLGTSAKSHANGSVYCPFCVYSLSISEYLVAKEKALLARNDLASFLHKNMWHLLKEVDLFRRKAHNSPGGSQHESCKDESNETPRLPPKRGGPEDHIGGHVNVEEETGVYTKLNVSSGKRVGVEWVHKENPSVRQLDEKSQRPVRDEDDSNKHFLEREKVVSPHRAHLEKKMQQELSKTQIINNSNQPACVHDVDSEEIFEDEKSISTRCSAICELKDTHYYQYPPISRSRRRKKLPWTAEEEEILKVGFQKFAGDHERGVPWKKIFEFGGNVFCSGRTPTDLKDKWRNICKSSSKSK* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00630 569 MobiDBLite consensus disorder prediction 335 371 - -
Pte15g00630 569 CDD SANT_TRF 508 563 - -
Pte15g00630 569 SMART sant 505 564 IPR001005 -
Pte15g00630 569 MobiDBLite consensus disorder prediction 401 421 - -
Pte15g00630 569 MobiDBLite consensus disorder prediction 346 371 - -
Pte15g00630 569 SUPERFAMILY FYVE/PHD zinc finger 239 295 IPR011011 -
Pte15g00630 569 ProSiteProfiles Myb-like domain profile. 501 562 IPR001005 -
Pte15g00630 569 SMART PHD_3 246 291 IPR001965 -
Pte15g00630 569 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 14 565 - -
Pte15g00630 569 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 321 IPR013083 -
Pte15g00630 569 Gene3D - 499 565 - -
Pte15g00630 569 Pfam Myb-like DNA-binding domain 507 560 IPR001005 -
Pte15g00630 569 SUPERFAMILY Homeodomain-like 508 567 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00630 Pte-Chr15 4612513 4614624 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g00630 Myb_DNA-binding 7.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00630 - - qsa:O6P43_010159 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00630 15 4612513 4614624 Pte15g00630 15 4612513 4614624 RCT