Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00615 ATGGAAGTGGCAAAAAATGAAAGAGCTAAAAACAAAGGAGAAGAACTGGAAGACTGTGATGGGAGTGAGAGCGGTGACTACACGTCCGAGGACGAAGGCGTCGAGGATTACAGACGAGGTGGGTACCATGCTGTCCGACTCGGAGACACCTTCAACAAGGGTCGGTATGTCGTTCAGAGTAAGCTCGGTTGGGGCCATTTCTCCACCGTCTGGCTTGCGTGGGACATGAAAAATTCTAGGTACGTGGCTTTGAAGGTTCAGAAGAGTGCACAACATTACACAGAGGCAGCTATGGATGAAATAACCATTTTGCAACAGATAACAGAAGGAGATCCAGATGATAAGAAGTGTGTTGTTAAGCTTTTGGACCATTTCAAGCATTCTGGCCCAAACGGGCAGCATGTATGTATGGTCTTCGAGTACTTGGGTGATAATCTTTTAACTATGATCAAGTACAGCGATTACCGAGGTTTGCCTATTCACATGGTCAAAGAAATATGCTTTCATATTTTGGTGGGTTTGGATTACTTGCACAGACAACTCTCTATCATACATACCGATCTGAAGCCTGAGAATATTTTGCTGTTGTCCACAATTGATCCTTCTAAGGATCCCAGGAGATCTGGTGCTCCCCTGATTCTTTTGGATTCCAAAGATAAAACCGCAATGGGGTCCAGTTTCGCAAAAGAAGTGAGCACATTCAATGGGGATTTGGCAGTAAGTCAGAAAAAAAACATCAGAAGACAGGCTAAGCAAGCAGCTCAAGAATGCGTGCAGAAGGAAGGTTCTGAGGGATTTGAGGGTGCTCAGGAAGAGTCCAGTCTGGCTGAATCATCTTCAAATACAATGTCAAATTTAGCCTCTGTGGTAGAATGGCCTTCTGCTTCAGGGAGCACGACTCAGATGCCAGATGTGGATGGAAAGCAAAGCAATCAAGCAGAAAGTCGGGGCAGTAAAAGACGAAATCGCTCCATGAGACGGAAGCTGCTTTCATCAGTTGACCTCAAGTGCAAACTGGTTGATTTTGGTAATGCTTGTTGGACTTACAAACAGTTCACAAGTGACATACAAACGAGACAATATCGCTGTCCAGAGGTGATTCTTGGATCAAAGTATTCTACATCTGCAGATCTTTGGTCTTTTGCTTGCATTTGTTTTGAGCTCGCAACTGGAGATGTACTATTTGATCCTCACAGTGGAGACAACTATGATAGGGATGAGGACCACTTAGCATTGATGATGGAACTACTAGGAATGATGCCTCGCAAGATTGCATTAGGAGGTCGCTATTCTCGTGATTTCTTCAACAGATACGGTGATTTGAGGCACATCCGGCGGTTGCGTTTCTGGCCCTTGAACAAAGTCCTCACAGAGAAATACGATTTTAGCGAGTCAGATGCAAAAGACATAGCAGACTTTCTGGTTCCCATCCTTGATTTTATTCCAGAGAAGCGGCCAACTGCTGGTGAGTGCCTTCTTCATCCATGGATCAATGCTGGTCCACGGCTATTGGAGCCATCATCTTTACCCGTACCGTCTGTTGATACTGTGGTTTCTGACAAAAAGAAAAGGGAATTGGATGAAGAGGCAATGCACGTTGGCATGGGAAGAATAGCCATCAACACCGATTCAAAATCAGCTCCTGAATCCACCTTGACTGACATAAAGTCTCCAAGGGCTTCTGCAATTACCTCTTCTCATTAG 1704 0.4489 MEVAKNERAKNKGEELEDCDGSESGDYTSEDEGVEDYRRGGYHAVRLGDTFNKGRYVVQSKLGWGHFSTVWLAWDMKNSRYVALKVQKSAQHYTEAAMDEITILQQITEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTMIKYSDYRGLPIHMVKEICFHILVGLDYLHRQLSIIHTDLKPENILLLSTIDPSKDPRRSGAPLILLDSKDKTAMGSSFAKEVSTFNGDLAVSQKKNIRRQAKQAAQECVQKEGSEGFEGAQEESSLAESSSNTMSNLASVVEWPSASGSTTQMPDVDGKQSNQAESRGSKRRNRSMRRKLLSSVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLTEKYDFSESDAKDIADFLVPILDFIPEKRPTAGECLLHPWINAGPRLLEPSSLPVPSVDTVVSDKKKRELDEEAMHVGMGRIAINTDSKSAPESTLTDIKSPRASAITSSH* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00615 567 FunFam CMGC/SRPK protein kinase 42 141 - -
Pte15g00615 567 Pfam Protein kinase domain 56 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00615 567 Pfam Protein kinase domain 333 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00615 567 SUPERFAMILY Protein kinase-like (PK-like) 51 515 IPR011009 -
Pte15g00615 567 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Pte15g00615 567 CDD STKc_SRPK 45 497 - -
Pte15g00615 567 MobiDBLite consensus disorder prediction 1 18 - -
Pte15g00615 567 Gene3D Transferase(Phosphotransferase) domain 1 110 198 - -
Pte15g00615 567 FunFam Serine/threonine-protein kinase SRPK-like protein 327 497 - -
Pte15g00615 567 MobiDBLite consensus disorder prediction 293 312 - -
Pte15g00615 567 MobiDBLite consensus disorder prediction 543 567 - -
Pte15g00615 567 Gene3D Transferase(Phosphotransferase) domain 1 314 497 - -
Pte15g00615 567 Gene3D Phosphorylase Kinase; domain 1 42 141 - -
Pte15g00615 567 MobiDBLite consensus disorder prediction 257 280 - -
Pte15g00615 567 MobiDBLite consensus disorder prediction 1 34 - -
Pte15g00615 567 ProSiteProfiles Protein kinase domain profile. 56 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00615 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Pte15g00615 567 MobiDBLite consensus disorder prediction 541 567 - -
Pte15g00615 567 MobiDBLite consensus disorder prediction 293 326 - -
Pte15g00615 567 SMART serkin_6 56 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00615 567 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00615 Pte-Chr15 4518626 4522746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00615 22 541 EF-hand Containing Proteins AT5G22840 67.173 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pte15g00615 Pkinase 3.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00615 K08832 - qsa:O6P43_005863 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00615 15 4518626 4522746 Pte15g00615 15 4518626 4522746 RCT