Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00613 ATGGAGTCTAACGGAATTGGTGGTGGAATGTTTGCAAGCTTAGGTCCTGGAATGTTAGGGTTAGAAACGCCTTTACACCACCAAGGAAACCCTGCCAATTCTCAAAATCCACATCACCTGCACCACCATCAAATGGCTCCCTATGCTCATCAGGATACTGATCATCACCAACAACAGTCTTCGATCAAACACGGGGGATATCCTTATTCTGCTAAAGCCAAGTCGCAGCTGACTCTAAGCGATGAAGACGAGCCTCTTATCGGGCCAGATGATAGCGGGGGAGATCCCAAGAAGAAAAATTCACCATGGCAAAGAATGAAGTGGACTGACACTATGGTAAGGCTGTTGATTATGGCGGTTTTTTACATCGGAGATGAGGGCGGTCCAGATGGGGTTGATCCTAGTGGGAAGAAGAAAGTCACCGGTGGTTTGCTGCAAAAGAAAGGGAAATGGAAATCGGTGTCGAGGGCTATGATGGAGAAGGGGTTTTATGTATCACCTCAGCAATGTGAAGATAAGTTTAATGATTTGAATAAGAGGTACAAGAGGGTGAATGATATTCTTGGCAAAGGCACTGCTTGCAAGGTTGTGGAAAATCAAAGCTTGTTGGAAACGATGGATTTGTCGCCAAAGATGAAAGACGAAGTTCGGAAATTGCTGAATTCAAAGCACTTGTTTTTCAGAGAAATGTGCGCATACCACAATAGTTGCGGCCATGGTACTGGTGTTGTTACATCATCTAATGCCCATCCGTCTCCAGAAACAGCAGTAGAGCCATCTCATGTTCAGCCGCAACATCCGCAGCCACCACAGTTAGCGCCGCAGCAAAGGTGTTCTCATTTGCAAGACAATGTGCAGGCTGCGAATAATTTGTGCAGACCAGAGAATACAGAGCTGAAAATGGTGAAAGGGGGAAGTGGTGGAGAGGATGACGACGGCGACGACGATTCTGACGACTCTGAGGATGATTATGATGAAGATGAGGACGACGTTTTGGAAGGTGGATCAAGAAGTCAAAGCGGACATGTACATGTAGATGGAGATGAAAATGAAGATAGGCCATCGTATAAAAAGGCAAGGAGGACAGATTTCTCAAGTCAATGTCAAGCACAGTTGATGCAGCAAATAAGTTCCGAGGTGATGAATGTGGTCCAAGACGGGAGCAAAAGTGCGTGGGAGATAAAGCAGTGGATGAAATTAAAGCTAATACATTTAGAAGAGCAGCAAGTAAATTGTCAAGCAGAGGCATGTGAGCTTGAGAAGCAGCGGCTGAAGTGGGTGAAGTATAGCAGCAAGAAAGAGAGAGAAATGGAGAGAGCTAAGCTTGAAAACAAAAGGAGACGACTAGAGAACGAGAGGATGGTTTTGTTGATAAGACAAAAAGAATTTGAGTTGTTTAGCCTTCAGCATCATCAGCAGCAGCAGAACTCGACCAATAAGAGGAGTGATCCTTCATCCATTAGTGGATGA 1470 0.4517 MESNGIGGGMFASLGPGMLGLETPLHHQGNPANSQNPHHLHHHQMAPYAHQDTDHHQQQSSIKHGGYPYSAKAKSQLTLSDEDEPLIGPDDSGGDPKKKNSPWQRMKWTDTMVRLLIMAVFYIGDEGGPDGVDPSGKKKVTGGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACKVVENQSLLETMDLSPKMKDEVRKLLNSKHLFFREMCAYHNSCGHGTGVVTSSNAHPSPETAVEPSHVQPQHPQPPQLAPQQRCSHLQDNVQAANNLCRPENTELKMVKGGSGGEDDDGDDDSDDSEDDYDEDEDDVLEGGSRSQSGHVHVDGDENEDRPSYKKARRTDFSSQCQAQLMQQISSEVMNVVQDGSKSAWEIKQWMKLKLIHLEEQQVNCQAEACELEKQRLKWVKYSSKKEREMERAKLENKRRRLENERMVLLIRQKEFELFSLQHHQQQQNSTNKRSDPSSISG* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00613 489 MobiDBLite consensus disorder prediction 342 360 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 244 262 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 468 489 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 19 105 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 90 104 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 272 293 - -
Pte15g00613 489 Pfam Myb/SANT-like DNA-binding domain 105 232 IPR044822 -
Pte15g00613 489 MobiDBLite consensus disorder prediction 51 65 - -
Pte15g00613 489 Coils Coil 432 459 - -
Pte15g00613 489 PANTHER F16F4.11 PROTEIN-RELATED 1 466 - -
Pte15g00613 489 Gene3D - 108 183 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 244 364 - -
Pte15g00613 489 MobiDBLite consensus disorder prediction 309 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00613 Pte-Chr15 4510813 4512737 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte15g00613 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00613 - - qsa:O6P43_009501 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00613 15 4510813 4512737 Pte15g00613 15 4510813 4512737 RCT