Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00611 AATGACACTGAATCCCTCACACAATTTCGCCTTCAAGCCGACTCTCATGGCTACCTCCGCTCCAACTGGACTGGCCCCAACGCTTGCTCTTCCACGTGGCGTGGCGTCCTGTGCTCTTCAAATGGAAGAGTCGTTGCTCTCTCTCTGCCTTCTCTCAATCTTCGAGGGTCCATCGATTTCCTTTCACAACTTCAACAACTACGTCTGCTTGACCTGCATGATAATCGTCTCAATGGCACCATTAAGTCTATCACCAACTGCACCCATCTCAAGCTTCTTTATCTGGCAGGCAACGATTTGTCTGGTGAGATACCACCTGAGATAGCCTCATTGAACCGTTTACTCAGGCTTGACCTCTCAGACAACAACATACGAGGACGAATTCCCAAGGAAATGTCTCAGTTGACTAGACTTCTCACTCTTCGTTTACAGAACAATGAGTTATCTGGGTCAATTCCTGATTTATCTGCTTCCTTAACTCATCTGAATGAGCTCAACATGACCAACAACGAATTTTCTGGACGCTTACCTGACGGTATGCTTAAGAATTTCAGTGACAAATGCTTTTCTGGGAATGAAGGTCTATGTGGCCCTAGCCCACTGCCTGATTGTTTGTTCACAACAGCGACTCCACCTCCAGTTGCATCCACCCCGATTGTTCCTTCCAACCCAAGCTCGTTGCCTCAAACAACAATGGTTCCTAAAGACAAGAGCCACTCACGAAAAGGGTTAGCGACAGGAGCTATTGTAGCAATAGTGGTCGCCAACTGTGTGCTGTTGGTACTGACATCCTTCATTGTGGCACACTACTATAGCGATGACACTACAGGCACAGACAAAAGCAAGCTTGTGTTCTTTGACAGAAGGAACCAATTTGAGCTTGAAGATTTGCTCAGGGCATCAGCTGAAATGCTTGGAAAAGGTAGTCTTGGGACAGTCTATAAGGCAGTTCTTGATGATGGTTCCACTGTCGCCGTGAAGCGGCTTAAGGACGCGAATCCCTGTGCTAGAAAAGAGTTCGAACAGTATATGGATGTGATCGGAAAGCTCAAACATCCTAACATTGTGAAATTCAGAGCATACTATTATGCGAAGGAAGAAAAGCTTCTTGTATATGATTATCTCTCTAATGGAAGCTTACATTCGCTTCTTCATGGTTGGGGTCCTGGAAGAATTCCGTTGGATTGGACTACAAGAGTCAGCTTGGCATTGGGAGCAGCCAAAGGACTTGCTCATATTCATGAGAAATATGGCGCAGCAAAAATACCACATGGGAATGTGAAATCTTCCAATATTCTACTAGACAAGAATGGCATTGCTTGCGTTTCTGACTTTGGCTTGTCACTACTGCTGAATCCTGTTCATGCTATAGCAAGATTAGGAGGATACAAGGCTCCTGAGCAAGCAGAAGTGAAGAGGCTTTCCCAAAAGGCAGATGTCTACGCGTTTGGGGTCTTGCTGTTGGAAATTCTCACGGGGAGAGCTCCTTCTCAGTACCTTGTATCAGCTGGTTTGAGAGTTGATGAGGAGGAACAAACTATTGATCTTCCCAAATGGGTTCGATCAGTAGTGAAGGAGGAATGGACTGCAGAGGTGTTTGATCCAGAACTCTTGCGCTACAAGAACATTGAGGAAGAGCTAGTGTCAATGCTGCATGTGGGGTTGGCATGCGTGGCTGCACAACCTGAAAAGAGGCCAACAATGGGTGAAGTGGTTAAGATGATTGAGGAAATAAGGGTTGAGCAATCGCCCATAGGAGAGGACTACGATGAATCCCGCAATTCACTTTCTCCTTCACTTGCTACCACAGACGAC 1815 0.4617 NDTESLTQFRLQADSHGYLRSNWTGPNACSSTWRGVLCSSNGRVVALSLPSLNLRGSIDFLSQLQQLRLLDLHDNRLNGTIKSITNCTHLKLLYLAGNDLSGEIPPEIASLNRLLRLDLSDNNIRGRIPKEMSQLTRLLTLRLQNNELSGSIPDLSASLTHLNELNMTNNEFSGRLPDGMLKNFSDKCFSGNEGLCGPSPLPDCLFTTATPPPVASTPIVPSNPSSLPQTTMVPKDKSHSRKGLATGAIVAIVVANCVLLVLTSFIVAHYYSDDTTGTDKSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYKAVLDDGSTVAVKRLKDANPCARKEFEQYMDVIGKLKHPNIVKFRAYYYAKEEKLLVYDYLSNGSLHSLLHGWGPGRIPLDWTTRVSLALGAAKGLAHIHEKYGAAKIPHGNVKSSNILLDKNGIACVSDFGLSLLLNPVHAIARLGGYKAPEQAEVKRLSQKADVYAFGVLLLEILTGRAPSQYLVSAGLRVDEEEQTIDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVAAQPEKRPTMGEVVKMIEEIRVEQSPIGEDYDESRNSLSPSLATTDD 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00611 605 CDD STKc_IRAK 305 578 - -
Pte15g00611 605 SUPERFAMILY Protein kinase-like (PK-like) 303 576 IPR011009 -
Pte15g00611 605 Gene3D Ribonuclease Inhibitor 116 204 IPR032675 -
Pte15g00611 605 ProSiteProfiles Protein kinase domain profile. 299 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00611 605 MobiDBLite consensus disorder prediction 583 605 - -
Pte15g00611 605 MobiDBLite consensus disorder prediction 589 605 - -
Pte15g00611 605 FunFam Nuclear pore complex protein NUP107 1 154 - -
Pte15g00611 605 Gene3D Ribonuclease Inhibitor 1 115 IPR032675 -
Pte15g00611 605 Gene3D Phosphorylase Kinase; domain 1 268 374 - -
Pte15g00611 605 MobiDBLite consensus disorder prediction 217 238 - -
Pte15g00611 605 Pfam Protein kinase domain 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00611 605 Gene3D Transferase(Phosphotransferase) domain 1 375 596 - -
Pte15g00611 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 581 IPR046959 -
Pte15g00611 605 MobiDBLite consensus disorder prediction 220 234 - -
Pte15g00611 605 FunFam pollen receptor-like kinase 1 269 374 - -
Pte15g00611 605 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 375 587 - -
Pte15g00611 605 SUPERFAMILY L domain-like 14 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00611 Pte-Chr15 4499375 4501392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00611 1 604 Receptor kinase-like Gene Family AT2G36570 65.031 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte15g00611 Pkinase 9.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00611 - - qsa:O6P43_009504 935.636