Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00610 ATGGCATACATGTGGCGTAGGCATGCAAGAAGCAACGCAAATAAACTGCCACCCGATGTCCCTCCTGGTCACTTAGCAGTCTTAGTTGGAGAAGCAAACAAGAGGTTTGTCATCAGGGCCGACTACCTGAACCACCCCATATTTCAAAACTTCCTAGACCAAGCATATGAAGAATATGGTCTCAAACAAACTGGCCCTTTGATCATACCTTGTGATGAAATTCTCTTCGAAGGCATAATTAAATGCCTTAAAGGAGGTACAGACCCACGTCAGATAACATCCCAAACTGCTGAAGGAAAGCGGGAATTGAGATTGCAGATGGAATCAAGACCACGACTTCAAGGCTGCTTCCAGTCAAGATCAACATGTTAA 372 0.4462 MAYMWRRHARSNANKLPPDVPPGHLAVLVGEANKRFVIRADYLNHPIFQNFLDQAYEEYGLKQTGPLIIPCDEILFEGIIKCLKGGTDPRQITSQTAEGKRELRLQMESRPRLQGCFQSRSTC* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00610 123 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
Pte15g00610 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00610 Pte-Chr15 4492138 4492509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00610 1 124 Calmodulin-binding Proteins AT4G34750 43.066 8.34e-27 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00610 K14488 - cave:132191641 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00610 15 4492138 4492509 Pte15g00610 15 4492138 4492509 RCT