Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00607 ATGGAAGTTAAGGAGAGCAATATCGCTAGTCCGAGACACTCCGTGTCTGACTCGCCTCCGACACCGTTGAGCTGCTCCATGCCCAGTCAGACGATGAACCTGCCTGGAAGTATGAATATGGAGTGCAGCGTTGAGGCAACTACAATAGCACCAATGACACAAACTATGGGAGCAATGTCTGCACCACCTGGAATGGGTGCAGGGGGACAAGGAAGCCTCGTTGATTCGTCAGGGAAAAAGAAGAGAGGGAGGCCAAGGAAATATGACGCCGATGGGAATTTAAGTTCGGCCTATCTGCAGAGACAACGAGTAGTGACTTCACCACCTGGTTTTTCTATGTCACCTGCTCTCCCATCCGAGTATTCTTCCAAAAGGGGACGGGGCCGGCCACCTGGCTCTGGCCACTGGCAGATTCTTGCATCTTTTGGTGAATTTTTTGCAAACACTGCTTGTACTGATTTTACACCTCACGTGGTGTCCATTCGTGCTGGAGAGGATGTCGCAGGAAAGATTTTTTCCTTTGCCCAGAAGGGTCAGAGAGGAATATGTATTCTCTCGGCCATTGGAACTGTCTCAAGTGTCACCATTAGGCAAGCTGGTTCCCCTAATGGGACGTTGACAACATATGAGGGTCGCTTTGAGATCTTGTCTTTATCTGGGTCATTTACGGTGAGTGAGACCGGTGGTTTGAGAAGTGAAACTGGTGGTCTGAGTGTCTCTTTGGCTGGTCCTGATGGTCGCGTAGTAGGAGGATGTGTTGCTGGTTTATTGACTGCTGCTGGTCCCATTCAAATTGTTGTTGGAAGTTTCACTCCCAATGAACGTAAGGTGCAGAAAAGGAAATATACTCATCGCGAACCCACTGTAATATCGGCAACCAAAGCTGCTCCAGAAACTGTCCATGCAATTCCTAATGGTGAGAATGCTGTTCAACCTTCTCTACAATTACAGGATCATGGCCATATAAACGGAGATGGCATCATAGGGCAGATACAGAATGTTAACGTCGCATCCAGTACTGTTGTTTGGAGTGATTCAGACGTCCTATCAGAGCAGAGAGAATCTCCTGACATTAATGTTTCTTTGAATAGTGAATAG 1098 0.4772 MEVKESNIASPRHSVSDSPPTPLSCSMPSQTMNLPGSMNMECSVEATTIAPMTQTMGAMSAPPGMGAGGQGSLVDSSGKKKRGRPRKYDADGNLSSAYLQRQRVVTSPPGFSMSPALPSEYSSKRGRGRPPGSGHWQILASFGEFFANTACTDFTPHVVSIRAGEDVAGKIFSFAQKGQRGICILSAIGTVSSVTIRQAGSPNGTLTTYEGRFEILSLSGSFTVSETGGLRSETGGLSVSLAGPDGRVVGGCVAGLLTAAGPIQIVVGSFTPNERKVQKRKYTHREPTVISATKAAPETVHAIPNGENAVQPSLQLQDHGHINGDGIIGQIQNVNVASSTVVWSDSDVLSEQRESPDINVSLNSE* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00607 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 48 320 IPR039605 GO:0003680
Pte15g00607 365 MobiDBLite consensus disorder prediction 1 37 - -
Pte15g00607 365 CDD DUF296 155 270 IPR005175 -
Pte15g00607 365 SMART AT_hook_2 124 136 IPR017956 GO:0003677
Pte15g00607 365 SMART AT_hook_2 79 91 IPR017956 GO:0003677
Pte15g00607 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 273 - -
Pte15g00607 365 MobiDBLite consensus disorder prediction 105 119 - -
Pte15g00607 365 ProSiteProfiles PPC domain profile profile. 151 291 IPR005175 -
Pte15g00607 365 MobiDBLite consensus disorder prediction 9 37 - -
Pte15g00607 365 MobiDBLite consensus disorder prediction 56 93 - -
Pte15g00607 365 MobiDBLite consensus disorder prediction 105 133 - -
Pte15g00607 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 156 271 IPR005175 -
Pte15g00607 365 Gene3D - 156 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00607 Pte-Chr15 4463562 4467622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00607 79 314 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 46.388 5.45e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00607 - - qsa:O6P43_009509 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00607 15 4463562 4467622 Pte15g00607 15 4463562 4467622 RCT