Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00602 ATGGAGAACGTTGGCCTTTCTGGTTCTCAATCATCTTCGACATTTGCTAATCCTTTAATGGAGTTTGAAGAATTTTCAACCTCGCTCTCAACGGCTCCTTCGTCCTCTTTTCATATGTTTGACCTCAAAGCTAGTGCAACTCCTTTTCTACCAACATCAGCTGGGGAAGAGATGGGGCATGTCGGTGCTCCTCGACCACTGGAGAATCCTATTCCGCCATTTCTGTCGAAAACATTCGACCTCGTGGATGATCAATCACTTGACCCTATTATCTCATGGGGTGCGGTGGGCCAGAGCTTTGTCGTTTGGGACCCTGTGGAGTTTGCGAGACTTGTCTTGCCAGGCAATTTCAAGCATAACAACTTCTCCAGTTTTGTTCGCCAGCTAAATACTTATGTGGGTATTTGTTGA 411 0.4623 MENVGLSGSQSSSTFANPLMEFEEFSTSLSTAPSSSFHMFDLKASATPFLPTSAGEEMGHVGAPRPLENPIPPFLSKTFDLVDDQSLDPIISWGAVGQSFVVWDPVEFARLVLPGNFKHNNFSSFVRQLNTYVGIC* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00602 136 FunFam Heat stress transcription factor B-4 67 135 - -
Pte15g00602 136 Gene3D - 67 134 IPR036388 -
Pte15g00602 136 PRINTS Heat shock factor (HSF) domain signature 125 136 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g00602 136 PRINTS Heat shock factor (HSF) domain signature 112 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g00602 136 PRINTS Heat shock factor (HSF) domain signature 74 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g00602 136 SMART hsfneu3 70 136 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g00602 136 SUPERFAMILY "Winged helix" DNA-binding domain 72 132 IPR036390 -
Pte15g00602 136 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 68 132 IPR027725 -
Pte15g00602 136 Pfam HSF-type DNA-binding 74 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00602 Pte-Chr15 4440928 4441338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00602 57 132 HSF AT5G03720 71.951 4.88e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte15g00602 HSF_DNA-bind 1.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00602 K09419 - qsa:O6P43_005885 160.999