Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00597 ATGGAAGATCATCAACTGCAACAGCAACAGCAGCATCAGCGGTATGGTATGCCCGATTTCAGGCAACTCATGAATGGAGCACGGTCATCTCATTTCCAAGCTATGCTGCCATCACAACCCACTTCAGACCTTTTCTCCACTCACCACAATCTAAACCCTAGTAACACTCACCACCAACACCAGCGACAGTTGGAAATGCTCATGTTTCGACCCCATGTAGCGGATGTAATGCCTCCTGTGCTTCACGACTTCGCTTCTGATTCTATTTCGACACCTACAACTGTTGCTGGCGCCGTTGCTAGCAACACTACAGCTTCAAATCCTTCTCTTAATGGAATCGAGGCTGAAACTGCTGGTGGCCTAGGTGGAGATGCATCCACCGGAAGATGGCCCAGACAAGAGACTCTCACTCTCCTTGACGTCAGATCTCGACTTGACCCTAAATTTAAAGAGGCAAATCAGAAAGGTCCCTTGTGGGATGAAGTTTCCAGGATCATGTCTGAAGAGCATGGTTATCAGAGGAGTGGAAAGAAATGCAGGGAAAAGTTTGAAAACTTGTATAAATACTACAAGAAAACTAAAGAAGGCAAGGCAGGAAGACAGGATGGAAAAAACTACAGGTTTTTTCGCCAGCTAGAAGCTCTCTATGGGGAAAGCAGCAATCATCCGACCTCAGGCCTAGACAGCAATTTTGTCGGAAGCAGCTTTGGGTTTCACGCGGCCATTGGCCAGACTTCCACCAAAGCAATTCAAGAAAATTTCCCACCACCCATGAAGCATTGCGATAGCCTTACCCTCACCAACTCCACTGAGTTTGACACGTCTTCTTCCGACGTCAATGGCGTGAGCAACGAGGCCTTATTGGAGAATGACTCTTTGGAGAAAAGAAGAAATGGGAGTAGTTCTCGAAGAGGATGGAAGGCCAAGATAAAAGACTTCATAGACTCGCAGATGAAGAAGCTGATGGAGAAGCAAGAAGCGTGGCTGGAGAGATTGATCAAGATCCTTGAACAAAAGGAGAGAGAGAGTGTTTTGAGGGAAGAAGGGTGGAGGAAACAAGAGGCAGCAAGGTTGGAAAGGGAACATAAGTTTTGGACAAGAGAGAGGGCATGGATTGAAGCTAGGGATGCTGCCTTGATTGAGGCTTTGCAAAAGTTAACTGGACGAGAAATCAAAGGTAATTATTCTGATCATGTTGAATTAATAGCTACTGAGGTTCAAAACCATAGTGAGAATCAGAACGAAGAAGGAAGTGAAATACTAAATAGCAACGTGAAAATTTCTGATCATAGCTGGTCGGACGCTGAGATAACAAGGCTAATACAGCTGAGATCTGAAATGGAGCACAGGTTCCAGCAATGTTGTGTCTCGGAACAAAATCTTTGGGAGGAAGTGGCAACCAAAATGGCTTGCTCAGTTTATGAGCAAAGGAGTGCTTTGGTGTACAAGGAGAAATGGGAAAGCATGCAAAAGTGCAACCAGAATTTTAAGGAGGGTAACAAGAAGCGCAAGGAAAAGGCGCGCAATTGCAACTATGAGAATATTGATCAATCCTCCTTATACAATCAAGGAAGTTCCTACTGTGTAATTAGCAATGGGCAACGACAAGAGACAGCGAAGTTTAGAGCTGATATTGATGGTGGTTCACCTTCCAATTCAAATGCCGGAAATGCAGTCTCTGATAGTTGTTTCCGCTTCTTCATGACTGAGGGAGAGAGCTTATGGGAAAATTACGGAATGAAGCTCAACAAGCTTGGAAATCAAAATCAGTGA 1773 0.449 MEDHQLQQQQQHQRYGMPDFRQLMNGARSSHFQAMLPSQPTSDLFSTHHNLNPSNTHHQHQRQLEMLMFRPHVADVMPPVLHDFASDSISTPTTVAGAVASNTTASNPSLNGIEAETAGGLGGDASTGRWPRQETLTLLDVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGESSNHPTSGLDSNFVGSSFGFHAAIGQTSTKAIQENFPPPMKHCDSLTLTNSTEFDTSSSDVNGVSNEALLENDSLEKRRNGSSSRRGWKAKIKDFIDSQMKKLMEKQEAWLERLIKILEQKERESVLREEGWRKQEAARLEREHKFWTRERAWIEARDAALIEALQKLTGREIKGNYSDHVELIATEVQNHSENQNEEGSEILNSNVKISDHSWSDAEITRLIQLRSEMEHRFQQCCVSEQNLWEEVATKMACSVYEQRSALVYKEKWESMQKCNQNFKEGNKKRKEKARNCNYENIDQSSLYNQGSSYCVISNGQRQETAKFRADIDGGSPSNSNAGNAVSDSCFRFFMTEGESLWENYGMKLNKLGNQNQ* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00597 590 CDD GT1 432 498 - -
Pte15g00597 590 Pfam Myb/SANT-like DNA-binding domain 430 516 IPR044822 -
Pte15g00597 590 Pfam Myb/SANT-like DNA-binding domain 129 215 IPR044822 -
Pte15g00597 590 Gene3D - 130 192 - -
Pte15g00597 590 Gene3D - 432 498 - -
Pte15g00597 590 ProSiteProfiles Myb-like domain profile. 122 187 IPR001005 -
Pte15g00597 590 SMART sant 428 498 IPR001005 -
Pte15g00597 590 SMART sant 126 189 IPR001005 -
Pte15g00597 590 PANTHER FI21293P1 60 534 - -
Pte15g00597 590 Coils Coil 322 342 - -
Pte15g00597 590 FunFam trihelix transcription factor PTL-like 130 192 - -
Pte15g00597 590 ProSiteProfiles Myb-like domain profile. 424 490 IPR001005 -
Pte15g00597 590 CDD GT1 129 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00597 Pte-Chr15 4403221 4406135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00597 9 588 Trihelix Transcription Factor Family AT5G03680 42.812 3.26e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte15g00597 Myb_DNA-bind_4 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00597 - - qsu:111994212 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00597 15 4403221 4406135 Pte15g00597 15 4403221 4406135 RCT