Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00595 ATGATAATGGCTCAAAAACACTTAATTGAGCTGTTGAAAGAGGATCAAAAACCATTCCATCTCAAGGAGTATATTGCAGATAAACGTAGCCAGCTCAAAGTGCCATCGCCGAAGACTAGTTTACAAGTGAAGAAAAGGCAACCCATCTGTGAAACCTCAAACTTTCCGGGAAAATTGTGCAACAGTTCCTGCATTTTCTCCTTCAAGGACACTCCGGACCTTAGGAATTCTCCACTATTCGAATTTACTCCCCTCTCCAAAAGCCCGTGTAAATCTCCTAATAGGATTTTCCTTCACATCCCTACTAGAACGTCAGCTCTTCTTCTTGAAGCTGCTCTTAGGATTCACAAGCAGTCATGCCGTACAAAATCGAAAACCCAAAACAAAAATCATGGCTTTGGGTTGTTTGGGTCATTATTGAAGAGGCTAACACCTAAACATCGGACCCAGAAGCGTGAAATTAAAGGTGAAGTGATGAAGGTCTCTGTAAAAGATATCTTGAGATGGGATTCATCGGTTGGGCGTGGAAAATTCTACAACGGAAGAAACAGCATTGACGATGAGAAAGTAATGCTGGCAGTTGAGGACAATCAAACAGCTGCCGTATGTTCATGTGAGATGAGCTTTTCCTGTTCTTGCGACAGTGGGCATAGCAATGCTGTTCGGTCTCCGAGAAACGAAGTGAAGTCTTTGGAAATGGGGACCTCCTCTTGCAGTAGTCTATCAGAAGGCTCTGAAGAGATAGACTTTGTATCTGAACATAAAAAAGTTCCAGAATGTGCTTGTTATGGAGAAAATGCCTTCTGCGAAAGCCCTTTTCGCTTTGTTCTGCAGAGAAGTCCATCTCCGGGCGGCAGGACACCCGAATTCCGTTCACCGACCACGTCCCCTATCCGACGTAGAACCGAGCACAAAAGTGATAATGGAGCAGAGTGTTTCAAAAAGTTGCAAACAGAGGAAGAGGATGAAGAGAGGGAACAATTCAGTCCTGTTTCTGTATTGGATACACCGTTTGAGGATGATTATGATGGACGTGAAAACGATTATGAGGAATATCAAGCATTTGACATGCAATGCCGCTATTCCATTGTCCAAAAAACAAATTTTCAGCTGCTACATAAGCTTCGCGGATTTCAGAAGCTCGCAGAGCTAGATCCAGTTGAACTTGAGAAAATAATGTTAGATCAAGAGGAAGAATATGATAATGAAACTGACCGAGATGGTAAGATTGGTTCTGAAGATTATGACAGGGAAACATTCGATAATGAAACGAATCTTGAAAGTTTTAGCACAGTGCCAAGCTTCCTAGGCATCCGGGGTATCCCATCACATATGAAGAGATTGGTATCAGACCTTATCAGCGAAGAAGAGAGACAAGTGGATGCTTTGTCTGACAAGGAGGATGTGATTAAAAGGGTATGCCAGAAGATTGAGTTGTGGACTGATGTGGAATCCAACACCATAGATATGATGGTTGAACAAGACTTCAGCGCACACATGAGTAGCTGGAAAAACTACACACAGCACAAGAGTGAGATGGCAATGGAAATTGAGCTTTCTATTTTTAGCTTTCTGATGGACGAATTTTCAGAAGAACTGGCTACTACATGTTAA 1614 0.425 MIMAQKHLIELLKEDQKPFHLKEYIADKRSQLKVPSPKTSLQVKKRQPICETSNFPGKLCNSSCIFSFKDTPDLRNSPLFEFTPLSKSPCKSPNRIFLHIPTRTSALLLEAALRIHKQSCRTKSKTQNKNHGFGLFGSLLKRLTPKHRTQKREIKGEVMKVSVKDILRWDSSVGRGKFYNGRNSIDDEKVMLAVEDNQTAAVCSCEMSFSCSCDSGHSNAVRSPRNEVKSLEMGTSSCSSLSEGSEEIDFVSEHKKVPECACYGENAFCESPFRFVLQRSPSPGGRTPEFRSPTTSPIRRRTEHKSDNGAECFKKLQTEEEDEEREQFSPVSVLDTPFEDDYDGRENDYEEYQAFDMQCRYSIVQKTNFQLLHKLRGFQKLAELDPVELEKIMLDQEEEYDNETDRDGKIGSEDYDRETFDNETNLESFSTVPSFLGIRGIPSHMKRLVSDLISEEERQVDALSDKEDVIKRVCQKIELWTDVESNTIDMMVEQDFSAHMSSWKNYTQHKSEMAMEIELSIFSFLMDEFSEELATTC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00595 537 PANTHER OS04G0572500 PROTEIN 3 533 - -
Pte15g00595 537 MobiDBLite consensus disorder prediction 296 322 - -
Pte15g00595 537 Pfam Domain of unknown function (DUF4378) 461 528 IPR025486 -
Pte15g00595 537 MobiDBLite consensus disorder prediction 279 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00595 Pte-Chr15 4391890 4395228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00595 2 339 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.143 1.86e-58 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00595 - - qsa:O6P43_009530 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00595 15 4391890 4395228 Pte15g00595 15 4391890 4395228 RCT