Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00594 ATGGATTTCCAACTGAAGCAATGGAAAGACCAGCATGAGTCAGAGGGACAACATTCTTCCAATATACCAAAACTCTTCCCCGAGGCTCATCAACCTTCTGGGTCTGCTCTTCCTTTGTTTGTATCCGAAGTCAACAACCTGTCACCATTTCCAGATTCTATATCTGCAGTTACCAGATTTCCCAGGATTGGAAGTTACTTCAGCTTAGCACAACGGCAGGAGCTTGAGATGCAGGCTCTGATTTTTAGGTATATGCTTGCCGGTGCTGCTGTGCCACCTGAGCTGCTTCAGCCAATAAAGAAAAGTGTCCTTTACTCTCATCCGTACTTTCTCCATTTCCCATCTTATCAGTCTGCTTTATCGCAATCGGGATATTGGGGAAAGGCAGCCATGGATCCCGAGCCAGGCAGGTGTAGGAGGACTGACGGCAAAAAATGGCGGTGTTCTAGGGATGTAGTGGCCGGACAAAAGTATTGCGAGCGTCATATGCATCGCGGCAGAAACCGTTCAAGAAAGCCTGTGGAATCTCCCACATCAAGCACTGCGGTTGGGGTTGGCGGTGGTGGTCCAAGTCTCGGTGCCAGCACAGCCAATATAACTGCGCCACACTTCACAGCAGCAGCTGTCTCGACGAGATCTCCTTTCGATCCCCTCCAACTCAACCAAAGTTCCTCTAGGGTAAAAATCGAGAATAGGGGCCTCTTTGGAAACCAAAATGGTAGCAACGGCAATAGCAGTTCTGGAGATGGCCACATACTGAGACATTTTTTCGATGATTGGCCAAGGTCACTTGAAAACCAAGATAATGCAGAAAACCATTCCAATTCTTTGAACTCATCTACGTGCCTCTCAATTTCAATGCCTGGAAATTCTGCTTCGGATGTATCGTTGAAGTTGTCCACCGGAGATGGGGAAGACACATGTCCCAGGAATGGAAATGCTGATTTTCAGCTACAGCATCCATTGGGTTGGGCAGGAGGATGGAATCCAACTAGTCATGTGGCTTCAATGGGAGGACCACTTGCAGAGGCTCTAAGATCGTCAACCTCTTCATCACCCACCAGCGTTCTACACCAAGTACCACGATGTTCTGCCTCGGAGGGCTAA 1107 0.4851 MDFQLKQWKDQHESEGQHSSNIPKLFPEAHQPSGSALPLFVSEVNNLSPFPDSISAVTRFPRIGSYFSLAQRQELEMQALIFRYMLAGAAVPPELLQPIKKSVLYSHPYFLHFPSYQSALSQSGYWGKAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVESPTSSTAVGVGGGGPSLGASTANITAPHFTAAAVSTRSPFDPLQLNQSSSRVKIENRGLFGNQNGSNGNSSSGDGHILRHFFDDWPRSLENQDNAENHSNSLNSSTCLSISMPGNSASDVSLKLSTGDGEDTCPRNGNADFQLQHPLGWAGGWNPTSHVASMGGPLAEALRSSTSSSPTSVLHQVPRCSASEG* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00594 368 Pfam WRC 133 175 IPR014977 -
Pte15g00594 368 SMART QLQ_2 65 101 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte15g00594 368 MobiDBLite consensus disorder prediction 1 17 - -
Pte15g00594 368 PANTHER GROWTH-REGULATING FACTOR 5 29 292 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte15g00594 368 MobiDBLite consensus disorder prediction 344 368 - -
Pte15g00594 368 MobiDBLite consensus disorder prediction 1 27 - -
Pte15g00594 368 ProSiteProfiles QLQ domain profile. 66 101 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte15g00594 368 Pfam QLQ 67 99 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte15g00594 368 MobiDBLite consensus disorder prediction 161 196 - -
Pte15g00594 368 ProSiteProfiles WRC domain profile. 132 176 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00594 Pte-Chr15 4382940 4385205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00594 1 360 GRF Transcription Factor Family AT3G52910 48.223 3.14e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pte15g00594 WRC 2.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00594 - - cave:132191959 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00594 15 4382940 4385205 Pte15g00594 15 4382940 4385205 RCT