Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00573 ATGCTAGGAAAGAAGATGGTGTCACTAAAGAAATTGGCCAAGAAGGTGAAGGCAGCTGGTGACAGGTCAGCTCATCATGAGTGTTTGCTTAAAGATCACGGTGAAACATCTCCAACCCGTGCAAAGACATCTACCCCAGTTGGTTATTTCGCAGTTTATGTAGGGGAAGACCGCCAACGGTTTGTAGTGCCAACCAGCTACCTGTCTCATCCATTATTCAAGATATTGCTGGAGAAGGCACAAGACGAATTTGGGTTCCAACAGGATAATGGTTTGCTTTTTCCATGTAGTGTGGCGACGTTTCAGGAAGTATTGAACGCAGTAGAGTGTTGCAATGGGAAGTTTGATTTGGGGAAAATTTTTAACGAGTTCTAG 375 0.4427 MLGKKMVSLKKLAKKVKAAGDRSAHHECLLKDHGETSPTRAKTSTPVGYFAVYVGEDRQRFVVPTSYLSHPLFKILLEKAQDEFGFQQDNGLLFPCSVATFQEVLNAVECCNGKFDLGKIFNEF* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00573 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 104 IPR003676 GO:0009733
Pte15g00573 124 Pfam Auxin responsive protein 10 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00573 Pte-Chr15 4207848 4208222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00573 46 109 Calmodulin-binding Proteins AT5G20810 57.812 1.33e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00573 K14488 - vvi:100252898 164.851