Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00559 ATGCGTGTATGCTCAGACAACCTATCTGCCCTCCGATCCTTCGGTCTCTTTCTTGCACGGGACCCTACGCGAAGCAACATAATGTCTACATTGAGAAAAAAGTTCTTCCGCCTGAGCACAGTGAAAGTCAACCTAGGGTGCGGCAGCTGCAGAAAACCGAAACTCTCCGACATATATGACCCTAACCCAAAACCCAAGTACCCCACATACCACAAACACAGGAACTACTATACTCACCCCAGCTCTTCAAGCTCCGGGGACAAAGATGATTCCTTTACCACTCGCACTACTGCTTCCACCACTCCTTTCTCTCCCTGTCCAGATGACTCGTCTCCGTTCTCTGAGAAACGGACCACCTACACGAACACTGCGAGCACTACATCAGTTGGAGGTTTCGGCAGAATAGGAGACGAGAGCGTCGCGGTGGAGAAGGACTCAGACGACCCGTACTTGGATTTCAGGCAGTCCATGCTTCAAATGATTTTGGAGAAACAGATATATTCAAAGGAAGACCTCAAGCAACTTCTCAGTTGTTTTCTTCAGCTTAATTCGCCATACCATCATGGAATCATCATCAGAGCCTTCACGGAAATATGGAACGGAGTCTATTCCAACAAGTTGCATTTGGGTCGTCGATCACGTGATCCCTTCTGA 654 0.4847 MRVCSDNLSALRSFGLFLARDPTRSNIMSTLRKKFFRLSTVKVNLGCGSCRKPKLSDIYDPNPKPKYPTYHKHRNYYTHPSSSSSGDKDDSFTTRTTASTTPFSPCPDDSSPFSEKRTTYTNTASTTSVGGFGRIGDESVAVEKDSDDPYLDFRQSMLQMILEKQIYSKEDLKQLLSCFLQLNSPYHHGIIIRAFTEIWNGVYSNKLHLGRRSRDPF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00559 217 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 81 203 IPR038933 GO:0045892
Pte15g00559 217 Pfam Transcriptional repressor, ovate 146 201 IPR006458 -
Pte15g00559 217 MobiDBLite consensus disorder prediction 69 119 - -
Pte15g00559 217 MobiDBLite consensus disorder prediction 75 119 - -
Pte15g00559 217 ProSiteProfiles OVATE domain profile. 142 201 IPR006458 -
Pte15g00559 217 NCBIfam uncharacterized plant-specific domain TIGR01568 140 200 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00559 Pte-Chr15 4091175 4092468 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte15g00559 Ovate 7.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00559 - - qsa:O6P43_006009 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00559 15 4091175 4092468 Pte15g00559 15 4091175 4092468 RCT