Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00541 ATGGGAAATAAGTGTGCAGGTTCTAGAAAATGCAGCAATTGCTGCTTTCAGTCTATGTCAAATCCTTCTTGGTGGTGTCGATCAAGATGGACTTTGGTTCCTAATTATAACGGTAAAGGTATTTCTAAAGCATCACAACCTGGAAATTCTACTTTTTCTCAGCCTGTTCAACACAGGTCTCCGAAACAAGGGAATATAGTTAATGAAGAGAGTAGAACAGGGTCTTTACAACCCAGAACAGTTGATGCGGAGTCAGTGCCTCCACAATTGGAACAGGATCCTAAGTTGTTGGAACCAAGAAAGTCTGTGGAAGAGATTAGGATACCGGAGGCGATTGAGCAAAAGGAAGAGAGGGTACCGACTTCAACCACTGGACACGAGAATACACCAGCAGAGCAAGCAAGGCAAAAGAAGCCACCCAACATCAAGAGGATAACAAGTGCTGGGCTGCAGACAGACTCAGTTTTACAGAGAAAAACTGGTCACTTGAAAGAGGATTATATTTTAGGGAAAAAACTTGGACATGGACAGTTTGGAACTACTTTTCTTTGTGTGGAGAAAAGTACCGGCAAAGAGTATGCGTGCAAATCCATTGCCAAAAGGAAATTGCGAACAATTGAAGATGTGGAGGATGTGAGGAGGGAAATTCAGATTATGCATCACGTGTCTGGGAGTTCAAATGTGGTTGCAATTAAGGGAGCCTATGAGGATGCTGTTGCTGTTCATGTAGTAATGGAATTGTGTGAAGGGGGTGAGCTTTTTGATAGGATTGTTCAGCGGGGGCATTACACAGAAAGAAAGGCAGCTGATTTGGCTAGGACTATAGTTGGTGTGATAGAATCATGCCACTCGTTAGGGGTGATGCATCGTGATCTTAAGCCTGAAAATTTTCTTTTTGTGAAAAAGGACGAAGACTCACCACTTAAAGCAATAGATTTTGGGCTATCCATATTTTTCAAACCAGGTGATATTCTAACAGATATTGTAGGAAGTCCTTATTACGTTGCGCCTGAAGTTTTGCGCAGGCAGTATGGTCTGGAAGCAGATGTTTGGAGCGCTGGTGTAATTATTTACATTTTATTATGCGGGGTGCCTCCTTTTTGGGGTGAGACGGAGCACGAGATATTTGATCAAGTTTTGAATGGTAATCTTGATATGAAATCAGAACCGTGGCCCTCTATCTCAGAAGGTGCAAAGGACTTGGTTAAGAGGATGCTCACAAGAGATCCTAAAAGAAGGATGACAGCCTACGAAGTCTTATGTCATCCTTGGGTTCGGATTGATGGATCTGCTCCAGATAAACCTCTAGATCCTGCAGTTTTGACTCGCTTGGAACAATTTTCTGCCATGGACAAACTTAAGAAAATGGCACTTAGAGTGAATTACTAG 1389 0.4255 MGNKCAGSRKCSNCCFQSMSNPSWWCRSRWTLVPNYNGKGISKASQPGNSTFSQPVQHRSPKQGNIVNEESRTGSLQPRTVDAESVPPQLEQDPKLLEPRKSVEEIRIPEAIEQKEERVPTSTTGHENTPAEQARQKKPPNIKRITSAGLQTDSVLQRKTGHLKEDYILGKKLGHGQFGTTFLCVEKSTGKEYACKSIAKRKLRTIEDVEDVRREIQIMHHVSGSSNVVAIKGAYEDAVAVHVVMELCEGGELFDRIVQRGHYTERKAADLARTIVGVIESCHSLGVMHRDLKPENFLFVKKDEDSPLKAIDFGLSIFFKPGDILTDIVGSPYYVAPEVLRRQYGLEADVWSAGVIIYILLCGVPPFWGETEHEIFDQVLNGNLDMKSEPWPSISEGAKDLVKRMLTRDPKRRMTAYEVLCHPWVRIDGSAPDKPLDPAVLTRLEQFSAMDKLKKMALRVNY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00541 462 ProSiteProfiles Protein kinase domain profile. 167 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00541 462 SUPERFAMILY Protein kinase-like (PK-like) 165 426 IPR011009 -
Pte15g00541 462 MobiDBLite consensus disorder prediction 42 82 - -
Pte15g00541 462 Gene3D Phosphorylase Kinase; domain 1 168 253 - -
Pte15g00541 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Pte15g00541 462 Pfam Protein kinase domain 169 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00541 462 MobiDBLite consensus disorder prediction 111 153 - -
Pte15g00541 462 Gene3D Transferase(Phosphotransferase) domain 1 254 462 - -
Pte15g00541 462 PANTHER SERINE/THREONINE-PROTEIN KINASE 155 454 - -
Pte15g00541 462 MobiDBLite consensus disorder prediction 42 93 - -
Pte15g00541 462 FunFam Calcium-dependent protein kinase 1 169 252 - -
Pte15g00541 462 FunFam Calcium-dependent protein kinase SK5 253 437 - -
Pte15g00541 462 SMART serkin_6 167 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00541 462 ProSitePatterns Protein kinases ATP-binding region signature. 173 200 IPR017441 GO:0005524
Pte15g00541 462 CDD STKc_CAMK 166 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00541 Pte-Chr15 3941026 3945916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00541 1 460 EF-hand Containing Proteins AT3G10660 59.711 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte15g00541 Pkinase 2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00541 K13412 - qsa:O6P43_009396 609.372