Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00524 ATGATCAGATATCTGGCTCTTGACGAGGCAGATCGGATGCTGGACATGGGATTTGAGCCACAAATAAGAAAAATAGTGCAGCAAATGGACATGCCTCCTCCTGGTGCAAGGCAGACAATGTTGTTCAGTGCCACTTTTCCAAAAGAGATACAGAAACTAGCTTCTGATTTTCTTTCCAACTATGTGTTTCTCACTGTTGGAAGGGTTGGTTCCAGTACTGATCTTATTGTTCAAAGAGTTGAATATGTTATTCAGTCGGACAAGAGGAGTCACCTAATGGACCTTCTTCATGCCCAGAGGGAAAATGGGAATCGAGGAAAGCAAGGTCTGACATTAGTATTTGTGGAAACAAAGAAAGGGGCGGATTCACTGGAATATTGGTTGTGCACTAACGGCTTCCCTGCAACTTCCATCCATGGAGATCGCAACAAGAACGAGAACTAG 444 0.4392 MIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGARQTMLFSATFPKEIQKLASDFLSNYVFLTVGRVGSSTDLIVQRVEYVIQSDKRSHLMDLLHAQRENGNRGKQGLTLVFVETKKGADSLEYWLCTNGFPATSIHGDRNKNEN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00524 147 Gene3D - 1 65 IPR027417 -
Pte15g00524 147 Pfam DEAD/DEAH box helicase 2 53 IPR011545 GO:0003676|GO:0005524
Pte15g00524 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 145 IPR027417 -
Pte15g00524 147 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 146 - -
Pte15g00524 147 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 64 IPR014001 -
Pte15g00524 147 Gene3D - 66 147 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00524 Pte-Chr15 3777252 3780613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00524 2 146 Eukaryotic Initiation Factors Gene Family AT3G19760 29.655 4.03e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00524 K11594 - gmx:100795756 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00524 15 3777252 3780613 Pte15g00524 15 3777252 3780613 RCT