Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00521 ATGCCGGCTGGTCACGGTCTGAGATCTCGTACCAGGGACTTGTTCGCTCGTCCCTTCAGAAAGAAGGGTACCATTCATGCCACCACTTACCTTAGGACTTATAGGATTGGGGACTACGTCGATGTTAAAGTCAATGGAGCTGTACACAAGGGTATGCCTCACAAGTTTTACCATGGTCGTACGGGACGTGTCTGGAATGTCACCAAAAGGGCTGTTGGCGTTGAGGTCAACAAGCAGGTGGGCAACAGGATTATTAGGAAGAGAATCCATGTCCGTATTGAGCATGTTCAGCCTTCTAGGTGCACTGAGGAGTTCCGTCTTAGGAAGATTAAGAATGATCAATTGAAGGCTGAGGCCAAGACCAGAGGTGAAATCATTAGCACCAAGAGGCAACCAGAGGGTCCTAAACCGGGTTTCATGGTGGAAGGTGCCACATTGGAGACTGTCACCCCCATTCCCTATGATGTGGTTAATGATCTTAAAGGGGGTTATTAG 495 0.4869 MPAGHGLRSRTRDLFARPFRKKGTIHATTYLRTYRIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAVGVEVNKQVGNRIIRKRIHVRIEHVQPSRCTEEFRLRKIKNDQLKAEAKTRGEIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00521 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Pte15g00521 164 Gene3D - 99 156 - -
Pte15g00521 164 FunFam 60S ribosomal protein L21 99 158 - -
Pte15g00521 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Pte15g00521 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Pte15g00521 164 FunFam 60S ribosomal protein L21 1 98 - -
Pte15g00521 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Pte15g00521 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00521 Pte-Chr15 3744920 3747297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00521 1 165 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 85.455 4.22e-106 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00521 K02889 - osa:9266412 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00521 15 3744920 3747297 Pte15g00521 15 3744920 3747297 RCT