Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00519 ATGGAAAAGACTGAGAGAGAGACTCGTGACTTCATGAAAGTTGAATCTTTCTCCCAACTCCCTTTTATCCGTCAAGCACAAACTAAACAAAAGGCAGCAGGAGTAAGGCTTTTTGGTAAGGAATTTGGTAATGGCAACGCCGATAGTCCTGCTACGCCGTCCAATGAGGAGTTCGAAGATATTGGCACTAAGGATGGGAACAGTACTGAGAACAGTGAGACCAACCGCAGGTTTAAATGCCATTATTGCTATAGGAACTTCCCTACCTCTCAAGCCTTAGGTGGTCACCAGAACGCTCACAAGAGAGAAAGGCAACATGCCAAAAGAGCACACCTTCAATCATCCATGTTACATGGCTGCATCACTGATTACTCGCACGTATATGGACTCGCGAACTATGGACAGAGTTCAGTCTCAACGACATATCCCGCATGGAATACTAATAACAGGTCAAGCACCATTGCTAATGATCTTGGTAGAATGTACGAAAGCCATGGAGGCTTCTATAACTCTCAGCAATCCATCACTGGAAACCCTTTAGGCACGTGGAGAACCCCAACAGTTCAAAGCAGCCCTACTTTAAGTCGTGAACAGTTGTTGCGTCCATTGCCGTTGTTTGCTGGTGATGATCTAAGTAGCAGAGCTTCACAGATTGTTGGGTCTAGTTCGCAAAGCAGGTTCGGTGCTAACTATGTCTCAAAACCGAGAGTTGAAGATCATTTGAGTTTGGATCTTCATCTGTAA 744 0.4503 MEKTERETRDFMKVESFSQLPFIRQAQTKQKAAGVRLFGKEFGNGNADSPATPSNEEFEDIGTKDGNSTENSETNRRFKCHYCYRNFPTSQALGGHQNAHKRERQHAKRAHLQSSMLHGCITDYSHVYGLANYGQSSVSTTYPAWNTNNRSSTIANDLGRMYESHGGFYNSQQSITGNPLGTWRTPTVQSSPTLSREQLLRPLPLFAGDDLSSRASQIVGSSSQSRFGANYVSKPRVEDHLSLDLHL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00519 247 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Pte15g00519 247 Pfam C2H2-type zinc finger 77 102 - -
Pte15g00519 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Pte15g00519 247 MobiDBLite consensus disorder prediction 40 73 - -
Pte15g00519 247 MobiDBLite consensus disorder prediction 58 73 - -
Pte15g00519 247 Gene3D Classic Zinc Finger 61 124 - -
Pte15g00519 247 PANTHER ZINC FINGER PROTEIN GIS 1 247 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pte15g00519 247 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00519 Pte-Chr15 3734499 3735242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00519 6 248 C2H2 Transcription Factor Family AT2G41940 40.000 5.40e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte15g00519 zf-C2H2_6 2.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00519 - - rcu:8268101 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00519 15 3734499 3735242 Pte15g00519 15 3734499 3735242 RCT