Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00497 ATGAGCGAATATCAGATTGGTTTCCAGCAACAAGCTCAACCTCTACAGAACCATGGATTAATTGGTGATTTCAATTTTGATTTTGGCGGTGACTCTTGCCAATTTTTCGATATCCCTGATACTTGGAACACATCAACAAATCATGGCCAACCAGCCTTGGAGAGTGGAGCTAAACAGAAACCTGAGAAATCATCCTGTACCATCTTGAGCCGTTTTCAATCACCTGCTTCTGCATTTTTTGCAACAGAACGATGCATGGGGCTTCCACTCTATGAATCTCAAACTGGCAGTACCTCTTTAAGCTCTCATTTCTCAGAGCCTAATGACTTGCAGCAATTCCCTATGTACAGATTTTCCAAGGATGGCCCTTCCAAAGAACCAACTCAACTGGTTGATCCTGACTTTGAGATGAGGAACACCTTACGATCAACGGTGAGACCTCAATTAAACCATAGATCCTCCCAGAAATCCGATGGAGGCCCATTGGGTATTTTGTCAGGGAACAGATTCCTTCGACCAGTACAGCTTGATTCCTTTTGTGAAAATCCCAACTCAATGGGGAGACAATTGTCTATGCCATCTAACAGAAATCAGGATCATGTGGCTGCTTCGGGTTCGTATTGTTCATCGATAAGACCAATCAACTACTCCTCGAAATCTCCAATATTTCCTTCTTCGAGTTCATCATCTGCTTCTACTGCCCATGCGTCGAGCAAAGCTCGTATAAGATGGACTCAAGATCTTCATGAGAAGTTTGTTGAGTGTGTTAATCGCCTTGGTGGCGCAGAGAAAGCAACACCAAAGGCCATATTGAGGCTAATGGAGTCAGATGGATTGACCATCTTTCACGTGAAAAGTCATTTGCAGAAATACAGAATTGCAAAATACATGCCAGAATCTATTGAAGGAAAAAGTGATAAAAGAGCAATCTTGAATGATGTCAATCAAGTTGACTTGAAAACTGGCTTGCAAATCAAGGAGGCACTGCAATTGCAGTTAGATGTTCAAAGGCGTCTGCACGAACAGTTAGAGGTCCAGAGAAATCTGCAGTTAAGAATTGAAGAACAAGGGAGACAGCTTAAGATGATGTTTGATCAGCAGCAGAAAACAGGTCACAGCATTTGTGAAACGTCAAACAGCGATGTAGAGGATCCAAATTGCCAAGGGTCTGAAAATTCCCTCTATCCATCCAAGATAAGTTAG 1203 0.4248 MSEYQIGFQQQAQPLQNHGLIGDFNFDFGGDSCQFFDIPDTWNTSTNHGQPALESGAKQKPEKSSCTILSRFQSPASAFFATERCMGLPLYESQTGSTSLSSHFSEPNDLQQFPMYRFSKDGPSKEPTQLVDPDFEMRNTLRSTVRPQLNHRSSQKSDGGPLGILSGNRFLRPVQLDSFCENPNSMGRQLSMPSNRNQDHVAASGSYCSSIRPINYSSKSPIFPSSSSSSASTAHASSKARIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPESIEGKSDKRAILNDVNQVDLKTGLQIKEALQLQLDVQRRLHEQLEVQRNLQLRIEEQGRQLKMMFDQQQKTGHSICETSNSDVEDPNCQGSENSLYPSKIS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00497 400 Pfam MYB-CC type transfactor, LHEQLE motif 323 370 IPR025756 -
Pte15g00497 400 FunFam Myb family transcription factor 238 296 - -
Pte15g00497 400 Coils Coil 326 346 - -
Pte15g00497 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 208 394 IPR044848 GO:0003700
Pte15g00497 400 NCBIfam myb-like DNA-binding domain, SHAQKYF class 239 294 IPR006447 GO:0003677
Pte15g00497 400 MobiDBLite consensus disorder prediction 183 203 - -
Pte15g00497 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 236 296 IPR017930 -
Pte15g00497 400 Pfam Myb-like DNA-binding domain 243 292 IPR001005 -
Pte15g00497 400 MobiDBLite consensus disorder prediction 371 400 - -
Pte15g00497 400 Gene3D - 238 297 - -
Pte15g00497 400 SUPERFAMILY Homeodomain-like 237 293 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00497 Pte-Chr15 3564371 3567378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00497 227 367 G2-like Transcription Factor Family AT4G28610 58.042 1.95e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g00497 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00497 - - qsa:O6P43_009486 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00497 15 3564371 3567378 Pte15g00497 15 3564371 3567378 RCT