Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00496 ATGACCCATTTCACCAAACATAGATTACCATTTGCTATCAAATGGATTTCCTCAAAATTTTATGAGAATTGTATTGCGTCATCAAAATCCCAGCTGGGGTTTATTGGCTGGTGGTTCCACACAATCCAAAAACCTAACCATTACGGCACAAAAGCTCTTGCTCAAAATCCGGTTGCGGCTTCCAAAGTTAGCTGTAAATCTCAGTCCAAATCGAATGAAAAGGAAGCCCAAGCTGCATTACTAGAATATCTACATTCCACTAGAAGCCTTCTTTTCTTGGATGCAGATCATATGAGTAAGAACTCCTCTGTTTTTGTAAAGAAGCTTTTGAAGAAAGTTGAAAATGAAGAGGATATTAGACGATCAATCACTCGCTTCTTGCGTTATCATCCCATCAATGAATTTGAACCCTTTTTTGAAAGCGTCGGCTTGAAATATTCAGAGTATGCTTCTCTCCTTCCACGTGATTTGATTTTCTTAAGTGATGATGAGCTTTTGCTGGAGAACTATCATGTCCTGTGCGACTATGGGATTGCTAGGAATAAGATAGGGAAGATTTTTAAGGAAGCATATGAAGTTTTTCGATATGACTCTGGGTTATTACAGTCAAAGCTTCGAGCTTATGAAGAACTTCTCCCTGATAGATCGAGTTTGTCGACATTTGTTACTGCTAGTCCACGCCTTTTGATTGGTGACATTAATGTTAAGTTTTCAAAGGTATTAGAGAAATTTAATTATTTGGGATTTAGCGTTGGATGGATTGAGGAGCAATTAATGGAGGAGAGTTCTTACAATTGGAACCAAATACTTGAACTTCTTCGCTTGTTTGGTGAGATTGGTTTCAGTGACGAGATGTTGACAAAATTAATCAGTCAGCACCCAGATCTCTTGTTCGAGAACTCAGGAAGTAGGACCTTTTCTCTCGTTGGGTTGCTGTTTAAATTTGGATTATCCAAAAGGCAATTATGTTCCATACTTTTGCAGTTTCCACAAATCCAAGTTGGCAAATTCCTTTTAAATTTAAGGAACTGTTTGCTCTTTCTAGATGAAATTGAGATGGAACTTCCAGAGATCAGGAAGCTTGTTCATTCTGAAGCCTTGTTCTTGGGATCATGCATGTTGAAGAAAGCCAACAGTTTACTGAATAACTTAAACGTGGGAAAGAAGCGGCTTTGCAGATTAATTCAGGAGAACCCAAAAGAAATGGCAAATTGGGTTCTAGGAGCTAGAGTTAATCCTTTGCCTAATTCAGGTGAAGATGAGAAATCACGGAGGCAGAAGATTGAGTTCTTGGTGAGTTTGGGGTTTGCCGAGAATTCATTAGATATGGAAAAAGCACTGAAGCTCTTCCGAGGCAAGGGAGTGGAACTTCAAGAGAGACTCATTTGCATTGTGCAAGCTGGTTTGGATCTGGAGGACGTGTATGAAATTGTTAAAACGTCTCCTCAGATTCTTAACCAGAAAAAGAGTGTGATCAAAATGAAGCTAGATTTTCTAGTATATGAGATGGGATATCCTATATCCTCTTTGATGAACTTCCCGTCTTATCTAAGCTATACTACTCAGAGAGTCAATCTTAGGTTATCAATGTACAATTGGCTCAAAGATCGAGGAGCTGTAGAACCTGGTCTGGCATTGAGCACTCTAGTTGCTTGCTCAGATAAAATATTCATAGGTCAATATGTCAAGCATCATCCTAGTGGTCCTCAAGTTTGGCAAGATTTAAAGGAAAGAATTTATTCAGAGAGATAA 1752 0.3876 MTHFTKHRLPFAIKWISSKFYENCIASSKSQLGFIGWWFHTIQKPNHYGTKALAQNPVAASKVSCKSQSKSNEKEAQAALLEYLHSTRSLLFLDADHMSKNSSVFVKKLLKKVENEEDIRRSITRFLRYHPINEFEPFFESVGLKYSEYASLLPRDLIFLSDDELLLENYHVLCDYGIARNKIGKIFKEAYEVFRYDSGLLQSKLRAYEELLPDRSSLSTFVTASPRLLIGDINVKFSKVLEKFNYLGFSVGWIEEQLMEESSYNWNQILELLRLFGEIGFSDEMLTKLISQHPDLLFENSGSRTFSLVGLLFKFGLSKRQLCSILLQFPQIQVGKFLLNLRNCLLFLDEIEMELPEIRKLVHSEALFLGSCMLKKANSLLNNLNVGKKRLCRLIQENPKEMANWVLGARVNPLPNSGEDEKSRRQKIEFLVSLGFAENSLDMEKALKLFRGKGVELQERLICIVQAGLDLEDVYEIVKTSPQILNQKKSVIKMKLDFLVYEMGYPISSLMNFPSYLSYTTQRVNLRLSMYNWLKDRGAVEPGLALSTLVACSDKIFIGQYVKHHPSGPQVWQDLKERIYSER* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00496 583 Gene3D Transcription termination factor 3, mitochondrial 101 262 IPR038538 -
Pte15g00496 583 Gene3D Transcription termination factor 3, mitochondrial 263 332 IPR038538 -
Pte15g00496 583 Gene3D Transcription termination factor 3, mitochondrial 333 574 IPR038538 -
Pte15g00496 583 Pfam mTERF 420 557 IPR003690 GO:0003690|GO:0006355
Pte15g00496 583 Pfam mTERF 273 441 IPR003690 GO:0003690|GO:0006355
Pte15g00496 583 FunFam Transcription termination factor MTEF18, mitochondrial 308 575 - -
Pte15g00496 583 PANTHER CGI-12 PROTEIN-RELATED 76 565 IPR003690 GO:0003690|GO:0006355
Pte15g00496 583 FunFam mTERF family protein 112 263 - -
Pte15g00496 583 SMART mt_12 475 506 IPR003690 GO:0003690|GO:0006355
Pte15g00496 583 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Pte15g00496 583 SMART mt_12 323 354 IPR003690 GO:0003690|GO:0006355
Pte15g00496 583 SMART mt_12 507 540 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00496 Pte-Chr15 3558487 3560686 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte15g00496 mTERF 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00496 - - cave:132162560 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00496 15 3558487 3560686 Pte15g00496 15 3558487 3560686 RCT