Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00489 ATGGGATTTCCGAGAGCTATAAGAAAAAAGCAAGTAGAGGAAGAGGAAGAAGAGAGAAAGATTTTAGAGGCTTCTTGGATGGCTTCCAACAAAAATAAAGCTAGTCAACAATGGACAGGTCATCCACAAAGTACTCCGCCACCTCAAAACCACAGCCATCTTATTCATCATCAACAGCAACAGGCTCATGAGCACCAGCAAATTTCTTTTGGCATGATGCAATCTTCTTCGTCATCTTCTATCCCTGCAAACTTCATAACCAAGGATGCTGGAGCTTATGATTTAGGAGAATTGGACCCAGCGCTTTTCCTCTACCTTGATGGACAAGACCCTTCTACTATACAGGAGCAAGGACCAGAGAACCCAGGGATGAGACCACCAACTTTGAACATTTTTCCATCTCAACCTATGCACGTGGAACCACCATCAACAAAGGCTTGTACGGACTTTGTCTCTCCCCTTAACAGTAGCTTCAAGAGACCATCAGAACCGTCCATGGACTTGGCCAATGCAAGAGCTGATGCTCCCTCTGCACCAGAGACAACAAAAGCTGTTAAAAAAGAGAACAACCGCAAGGGTCCAACACCGAGTTCTGAGCAGGAAGGACCCAAAACTCCTGACCCTAAGACACTAAGAAGACTTGCACAGAATAGGGAAGCAGCTAGGAAAAGCAGGCTTAGAAAAAAGGCATATGTTCAGCAACTAGAATCAAGTAGGATTAAGCTTAATCAGCTCGAGCAAGAATTACAGCGCGCTAGAGCTCAGGGCATGATTTTTGGAGGGAGTGGTCTTCCAGGGGATCAACAAGGGCTTCCTCTTCCCATTCCCAACATTAGTTCCGTGTTTGATGTAGAATATGCGAGGTGGCTAGAGGAACACCATCGTCTAATGTGCGAGCTCAGAGCTGCGGTACAGGAGCATCTCCCGGAGGCTGAGCTTCGGCTGTTTGTGAACAATTGTTTAGCACACTACGACGAAGTAATGAATCTGAAAAGCATGGTAGCCAAAACAGATGTATTTCATCTCGTTTCTGGTACGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGTTTCAGGCCCTCTGAAGTTATTAAGGTTGTCATGCATCAAGTTGAACCCTTAACTGAGCAACAACTATTAAGTATCTGTGGTCTGCAACAATCGACTCAACAGGCTGAAGAGGCTCTATCGCAAGCGCTGGAGGGCCTAAACCAGTCTCTGTCGGAAACAATAACCTCGGATTCATTGAGCTGTGCCCCTAACATGGCTAATTACATGGGGCAGATGGCAATCGCGATGAACAAGCTTTCTACCCTTGAAGGTTTCGTTAGACAGGCGGATGGTCTGAGACAGCAGACACTTCACCGTCTTAATCAACTCCTAACAACACGACAAGCAGCGAGGTGTTTGTTGGCAATTGCAGAGTATTTTCATCGTCTCAGAGCCCTTAGTTGCCTATGGATTGCCCGCCCTCGACAAGAATGA 1494 0.4652 MGFPRAIRKKQVEEEEEERKILEASWMASNKNKASQQWTGHPQSTPPPQNHSHLIHHQQQQAHEHQQISFGMMQSSSSSSIPANFITKDAGAYDLGELDPALFLYLDGQDPSTIQEQGPENPGMRPPTLNIFPSQPMHVEPPSTKACTDFVSPLNSSFKRPSEPSMDLANARADAPSAPETTKAVKKENNRKGPTPSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGMIFGGSGLPGDQQGLPLPIPNISSVFDVEYARWLEEHHRLMCELRAAVQEHLPEAELRLFVNNCLAHYDEVMNLKSMVAKTDVFHLVSGTWKTPAERCFMWIGGFRPSEVIKVVMHQVEPLTEQQLLSICGLQQSTQQAEEALSQALEGLNQSLSETITSDSLSCAPNMANYMGQMAIAMNKLSTLEGFVRQADGLRQQTLHRLNQLLTTRQAARCLLAIAEYFHRLRALSCLWIARPRQE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00489 497 Coils Coil 5 25 - -
Pte15g00489 497 MobiDBLite consensus disorder prediction 148 163 - -
Pte15g00489 497 MobiDBLite consensus disorder prediction 28 66 - -
Pte15g00489 497 Pfam Seed dormancy control 297 371 IPR025422 GO:0006351|GO:0043565
Pte15g00489 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 251 IPR004827 GO:0003700|GO:0006355
Pte15g00489 497 MobiDBLite consensus disorder prediction 24 66 - -
Pte15g00489 497 CDD bZIP_HBP1b-like 209 261 - -
Pte15g00489 497 Pfam bZIP transcription factor 209 247 IPR004827 GO:0003700|GO:0006355
Pte15g00489 497 Gene3D - 208 257 - -
Pte15g00489 497 FunFam BZIP family transcription factor 208 257 - -
Pte15g00489 497 PANTHER TRANSCRIPTION FACTOR TGA9 130 496 - -
Pte15g00489 497 SMART brlzneu 205 258 IPR004827 GO:0003700|GO:0006355
Pte15g00489 497 ProSiteProfiles DOG1 domain profile. 279 493 IPR025422 GO:0006351|GO:0043565
Pte15g00489 497 MobiDBLite consensus disorder prediction 110 211 - -
Pte15g00489 497 Coils Coil 228 255 - -
Pte15g00489 497 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 212 227 IPR004827 GO:0003700|GO:0006355
Pte15g00489 497 SUPERFAMILY Leucine zipper domain 209 251 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00489 Pte-Chr15 3508383 3514861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00489 83 497 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.253 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte15g00489 DOG1 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00489 K14431 - rcu:8277515 682.559