Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00488 ATGGATTCTATTTGTGCAGAGTTTGATATGAGACTATGTTCTTTAAGAAACCTTTCCGTCATCCCTCGCTCTCCCGTTGCTTGTCCGTTCCTCCGTTGCTGGCGCCTGCTCTCCAAGCCGTTGATTGTTGCAGATCTGTTTTCTGTTCCTCTGTGCGTAAGTTCATGTGTTGCTCGCCCCGTGTTGCTGCGCCTTGCAAGGATTGCAGAGAAGAATAAAAGAGTTGCCAAGGCAAAGTTAGAAGCTGCTGAGTATCAAAAGCTCCTTGCTTCTAGGTTGAAGGAGCAGAGAGAAAGACGAAGTGAGAGCTTGGCCAAGAGGAGATCCAAGCTTTCTAATGCTTCCATCCACGACAGCGGCATAATATTTTGTTTGATGAGAATTGATGCTGCCAAGTTCTAG 402 0.4677 MDSICAEFDMRLCSLRNLSVIPRSPVACPFLRCWRLLSKPLIVADLFSVPLCVSSCVARPVLLRLARIAEKNKRVAKAKLEAAEYQKLLASRLKEQRERRSESLAKRRSKLSNASIHDSGIIFCLMRIDAAKF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00488 133 Coils Coil 66 88 - -
Pte15g00488 133 Gene3D - 53 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00488 Pte-Chr15 3497957 3498861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00488 66 114 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 77.551 1.15e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00488 K02991 - mof:131159578 85.8853