Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00475 ATGCCGATCCGTAACATCGCTGTGGGTAGATATGAAGAGGCATATCAACCAGACGCCATTAAGGCAGGTCTGGCGGAGTTCTTCTCAACCCTAATCTTTGTTTTCGCCGGGTCAGGTTCCGGCATGGCCTACAATAAGCTCACCAACGATGGACCCGCTTCCCCTGCTGGCCTCATATCCGCCTCCATCGCCCACGCCTTTGCACTCTTCGTCGCTGTCTCCATCGGTGCAAACATCTCAGGTGGACACGTTAACCCAGCTGTTACATTTGGTGCCTTCATCGGTGGTAACATCTCCCTTTTCCGTGGTATTCTCTACATCATTGCTCAGCTCCTTGGATCCATTGTCGCTTCCTTGCTACTTAAGTTCGTCACTGGTGGCCTGGCTGTACCGGCATTTGCTCTTTCTGGTGTGGGTGTGTGGCAAGGTGTAGTCTTTGAGATCGTGATGACATTCGGACTGGTGTACACCGTTTACGCTACAGCTGTTGACCCTAAGAAGGGTAGTTTGGGAACCATCGCACCCATTGCCATCGGTTTCATTGTGGGTGCCAACATCTTGGCCGGAGGGGCATTCTCCGGAGCATCCATGAACCCAGCAGTGACATTCGGACCCGCAGTTGTTAGCTGGAGTTGGAACAACCACTGGGTCTACTGGCTCGGACCTCTGCTCGGTGGTGGACTGGCTGGTGTTGTGTACGAGTTGTTGTTCATCAGCCACTCCCATGAACAGTTGCCTGTAGCTGATTACTGA 753 0.5299 MPIRNIAVGRYEEAYQPDAIKAGLAEFFSTLIFVFAGSGSGMAYNKLTNDGPASPAGLISASIAHAFALFVAVSIGANISGGHVNPAVTFGAFIGGNISLFRGILYIIAQLLGSIVASLLLKFVTGGLAVPAFALSGVGVWQGVVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVTFGPAVVSWSWNNHWVYWLGPLLGGGLAGVVYELLFISHSHEQLPVADY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00475 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte15g00475 250 CDD MIP 21 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 FunFam Probable aquaporin TIP1-1 4 250 - -
Pte15g00475 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Pte15g00475 250 Pfam Major intrinsic protein 16 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00475 250 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Pte15g00475 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00475 Pte-Chr15 3399104 3400351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00475 1 251 Major Intrinsic Protein MIP AT2G36830 79.365 2.84e-142 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00475 K09873 - zju:107431962 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00475 15 3399104 3400351 Pte15g00475 15 3399104 3400351 RCT