Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00462 ATGTCACTAGATTCTGAGGAGATAAAGACAATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCCTGTCTTCTCCTTCTAATCCTCCAATCCCTCCTACTGCTGTAACTACTGTTACTCTTCCTTCCACATGTAACAGACCTTCTTCAGAGGCCGAAGGCCAAGACCCCCTCAAGGAAGAAGAAGCTCCTCAAAGAGAGAGAAAAGAAATGGAGGTCTCTGAACCGAAAAAAGAAGGGGGAGCTGGGGGAATAGTTGTTAATGGGAGTGGTGGTAGTGGGGAGAAGCCTGGGACCATTCCCTCTGTTGGGTTCGACCAGCTTTTCAGATTCGCTGATGGGTTGGATTATGTTTTGATGTTAATTGGGACTGTTGGAGCGATTGTACATGGCTGCTCTCTGCCTCTCTTCCTTCGATTCTTTGCTGATCTCGTCCATTCTTTCGGGTCAAATGCAAACGATACGGATAAGATGATGCACGAAGTTTTAAAGTATGCATTATACTTCCTGGTTGTGGGTGCTGCAATATGGGCATCATCATGGGCAGAAATATCTTGCTGGATGTGGACTGGAGAGAGACAATCAACTAAGATGAGGATCAAATACCTTGAAGCTGCTCTAAACCAGGACATTCAGTACTTTGATACGGAGGTTCGAACATCCGACGTTGTTTTTGCCATTAACACTGATGCAGTGATGGTCCAAGATGCTATTAGTGAGAAGTTGGGCAATTTCATTCACTACATGGCTACATTTGTGTCTGGGTTTGTGGTGGGTTTCACTGCCGTGTGGCAATTAGCTCTGGTAACTCTTGCCGTTGTCCCTTTGATTGCTGTGATCGGAGCCATTCACACAACCACTTTAGCCAAATTCTCTGGAAAAAGTCAGGAAGCTCTTTCACAAGCTGGGAACATAGTTGAACAGACTATTGTTCAAATCCGAGTTGTTTTGTCATTCGTCGGTGAGTCCCGAGCATTACAAGCTTACTCATCAGCATTGAAAGTAGCGCAAAAGGTCGGCTACAGAATTGGATTTGCTAAGGGAATGGGATTAGGGGCAACTTATTTTGTTGTCTTCTGTTGTTATGCGCTTCTGCTGTGGTACGGAGGTTATCTAGTCAGACATCACTACACTAATGGAGGGCTAGCCATAGCAACCATGTTTGCTGTTATGATTGGTGGACTAGGTTTGGGACAATCTGCACCAAGCATGAGTGCATTTGCTAAAGCCAAAGTTGCAGCTGCTAAGATTTTCCGTATAATTGATCACAAGCCTAGTGTAGACAGAAACAGTGAATCTGGTTTGCAATTGGAAACTGTTACTGGGTTTATTGAGTTAAAAAATGTTGACTTTTCTTACCCATCAAGGCCAGAGGTTAAGATCCTTAACAATTTCAGCTTAAGCGTACCAGCAGGCAAGACCATAGCTTTAGTGGGGAGCAGTGGTTCTGGGAAGAGTACTGTTGTCTCCCTTATTGAGAGATTCTATGATCCCACATCAGGACAAGTTCTGCTAGATGGGCATGATATTAAGACACTGAAACTTGCGTGGTTGAGGCAGCAAATTGGACTAGTTAGCCAAGAGCCAGCCTTGTTTGCTACCACCATTAAAGAAAATATACTACTGGGTCGGCCTGATGCAGATCAAGAGGAGATTGAAGAATCTGCTAGAGTAGCTAATGCCCATTCTTTCATCATCAAGCTCCCAGAAGGTTTTGAAACCCAGGTTGGTGAGAGGGGGCTGCAGCTTTCTGGAGGACAGAAGCAGAGGATTGCTATAGCGAGGGCAATGCTAAAAAATCCAGCAATCTTGCTTTTGGACGAGGCAACAAGTGCCTTAGATTCTGAGTCAGAAAAGCTAGTGCAGGAGGCCCTTGACCGCTTCATGATTGGAAGAACAACTCTAGTAATCGCTCATCGCCTCTCCACTATCCGAAAAGCTGATCTTGTTGCTGTACTACAGCAAGGGAGTGTTTCAGAAATAGGAACCCATGATGAACTCTTTGCTAAGGGTGAAAATGGAGTCTATGCAAAGCTAATCCGCATGCAGGAGATGGCACATGAAACTGCTCTTAATAATGCCAGAAAAAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTAAGCTCTCCAATAATAGCCAGAAATTCTTCTTACGGCCGATCACCATACTCACGCCGCCTCTCTGACTTCTCCACTTCTGATTTTAGTTTTTCTCTTGATTCTTCACATGCCAATTACCGACTTGAAAAACTTGCTTTCAAAGAGCAAGCAAGCTCGTTCTGGCGCCTTGCAAAAATGAACTCTCCTGAATGGGTTTATGCCTTGGTTGGTTCTATAGGCTCCGTTGTTTGTGGCTCCCTCAGTGCTTTCTTTGCTTATGTTCTGAGTGCCGTCCTCAGTGTATATTATAGTCAGGACCATGCATACATGATTAAACAAATTGACAAGTACTGCTATTTGCTGATTGGACTTTCATCTGCGGCACTTCTCTTCAACACGTTGCAGCATTCCTTCTGGGACATTGTGGGTGAAAATCTTACCAAAAGAGTGAGGGAGAAAATGCTAATTACAGTGCTTAAAAATGAGATGGCGTGGTTCGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTGGCTCTGGATGCCAACAATGTGAGATCAGCCATTGGAGATCGTATTTCAGTGATTGTGCAGAACACTGCACTAATGCTAGTTGCTTGCTCAGCAGGGTTTGTTTTGCAGTGGCGCCTTGCTCTTGTTCTCATTGCTGTCTTCCCAGTTGTGGTTGCTGCCACCGTTTTGCAGAAAATGTTTATTACTGGATTCTCGGGAGACCTAGAAAGTGCTCATGCCAAGGCCACACAATTGGCAGGGGAGGCTATAGCTAATGTTAGAACTGTGGCTGCCTTCAATTCAGAAGTGAAAATTGTTGGTCTTTTCACCACCAATCTGCAAATTCCACTTCGCCGTTGTTTCTGGAAAGGGCAGATTTCTGGAAGTGGATTTGGAATAGCTCAATTTGCACTTTACGGTTCTTATGCACTCGGTCTTTGGTATGCTTCTTGGCTTGTAAAGCATGGCATCTCTGATTTCTCCAAAACAATCAGAGTTTTTATGGTCCTCATGGTGTCTGCGAATGGTGCTGCCGAAACATTGACACTGGCTCCTGATTTCATCAAGGGAGGTCAGGCCATGAAGTCAGTATTTGATCTTCTTGATCGTAGGACTGAAATAGAGCCTGATGATCCAGATGCCACTCCTGTTCCTGATCGCCTTAGAGGAGAAGTTGAATTTAAACATGTAGACTTCTCTTATCCCACTCGCCCTGATGTGCCAATATTCCGCGACCTTAGTCTACGTGCGAGGGCAGGTAAGACTCTTGCCCTTGTAGGACCGAGTGGCTGTGGTAAGAGTTCAGTCATAGCACTCATTCAGAGATTTTATGATCCAACATCTGGAAGGGTGATGATTGATGGGAAGGACATAAGAAAGTACAATCTTAAATCCTTGAGAAGGCACATAGCCGTGGTACCACAGGAGCCTTGCCTCTTTGCTACTTCTATCTACGAAAACATTGCTTATGGTCATAATTCTGCAACTGAAGCTGAGATTATCGAAGCAGCAACTCTTGCCAACGCACATAAATTCATATCCAGCTTGCCAGATGGATACAAAACATTTGTTGGTGAGCGAGGAGTTCAACTGTCTGGAGGACAAAAACAGAGAATAGCAATTGCTCGAGCACTTGTAAGGAAGGCTGAACTTATGCTCCTTGATGAGGCAACAAGTGCGCTTGATGCGGAGTCTGAGAGATCAGTTCAGGAGGCTCTAGAGCGAGCCTGTTCAGGAAAAACAACAATTGTTGTAGCACATAGGCTTTCAACCATTAGAAATGCCCATGTCATTGCCGTAATTGATGATGGGAAAGTGGCGGAGCAGGGATCACATTCTCAGTTATTGAAAAACTATCCTGATGGATGCTATACTCGAATGATTCAATTACAGAGATTCACTCACAGCCAGGTAATCGGAATGGCATCAGGTTCAAGTTCATCGGCAAAACCAAAAGATGAAGGCTAG 4095 0.4471 MSLDSEEIKTIEQWKWSEMQGLELLSSPSNPPIPPTAVTTVTLPSTCNRPSSEAEGQDPLKEEEAPQRERKEMEVSEPKKEGGAGGIVVNGSGGSGEKPGTIPSVGFDQLFRFADGLDYVLMLIGTVGAIVHGCSLPLFLRFFADLVHSFGSNANDTDKMMHEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKFSGKSQEALSQAGNIVEQTIVQIRVVLSFVGESRALQAYSSALKVAQKVGYRIGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMSAFAKAKVAAAKIFRIIDHKPSVDRNSESGLQLETVTGFIELKNVDFSYPSRPEVKILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLAWLRQQIGLVSQEPALFATTIKENILLGRPDADQEEIEESARVANAHSFIIKLPEGFETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSFSLDSSHANYRLEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSVVCGSLSAFFAYVLSAVLSVYYSQDHAYMIKQIDKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLITVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACSAGFVLQWRLALVLIAVFPVVVAATVLQKMFITGFSGDLESAHAKATQLAGEAIANVRTVAAFNSEVKIVGLFTTNLQIPLRRCFWKGQISGSGFGIAQFALYGSYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMKSVFDLLDRRTEIEPDDPDATPVPDRLRGEVEFKHVDFSYPTRPDVPIFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATSIYENIAYGHNSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDEATSALDAESERSVQEALERACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSQLLKNYPDGCYTRMIQLQRFTHSQVIGMASGSSSSAKPKDEG* 1365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00462 1364 ProSitePatterns ABC transporters family signature. 585 599 IPR017871 GO:0005524|GO:0016887
Pte15g00462 1364 ProSitePatterns ABC transporters family signature. 1240 1254 IPR017871 GO:0005524|GO:0016887
Pte15g00462 1364 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 446 682 IPR003439 GO:0005524
Pte15g00462 1364 SUPERFAMILY ABC transporter transmembrane region 110 427 IPR036640 GO:0005524|GO:0016020
Pte15g00462 1364 Gene3D ABC transporter type 1, transmembrane domain 109 698 IPR036640 GO:0005524|GO:0016020
Pte15g00462 1364 Pfam ABC transporter 464 613 IPR003439 GO:0005524
Pte15g00462 1364 Pfam ABC transporter 1120 1268 IPR003439 GO:0005524
Pte15g00462 1364 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1101 1337 IPR003439 GO:0005524
Pte15g00462 1364 PANTHER ABC TRANSPORTER B FAMILY 100 790 IPR039421 -
Pte15g00462 1364 FunFam ABC transporter B family member 1 1091 1341 - -
Pte15g00462 1364 CDD ABC_6TM_Pgp_ABCB1_D1_like 122 407 - -
Pte15g00462 1364 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 778 1065 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00462 1364 SMART AAA_5 473 659 IPR003593 GO:0016887
Pte15g00462 1364 SMART AAA_5 1128 1320 IPR003593 GO:0016887
Pte15g00462 1364 Pfam ABC transporter transmembrane region 782 1048 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00462 1364 Pfam ABC transporter transmembrane region 122 395 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00462 1364 CDD ABC_MTABC3_MDL1_MDL2 1101 1340 - -
Pte15g00462 1364 Gene3D - 1092 1347 IPR027417 -
Pte15g00462 1364 SUPERFAMILY ABC transporter transmembrane region 765 1088 IPR036640 GO:0005524|GO:0016020
Pte15g00462 1364 CDD ABC_MTABC3_MDL1_MDL2 446 685 - -
Pte15g00462 1364 FunFam ABC transporter B family member 1 109 444 - -
Pte15g00462 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1092 1340 IPR027417 -
Pte15g00462 1364 MobiDBLite consensus disorder prediction 23 97 - -
Pte15g00462 1364 FunFam ABC transporter B family member 1 436 686 - -
Pte15g00462 1364 MobiDBLite consensus disorder prediction 55 79 - -
Pte15g00462 1364 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 123 411 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00462 1364 Gene3D ABC transporter type 1, transmembrane domain 754 1088 IPR036640 GO:0005524|GO:0016020
Pte15g00462 1364 FunFam ABC transporter B family member 1 757 1066 - -
Pte15g00462 1364 MobiDBLite consensus disorder prediction 39 53 - -
Pte15g00462 1364 CDD ABC_6TM_Pgp_ABCB1_D2_like 767 1083 - -
Pte15g00462 1364 FunFam ABC transporter B family member 19 1067 1089 - -
Pte15g00462 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 685 IPR027417 -
Pte15g00462 1364 Gene3D - 436 686 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00462 Pte-Chr15 3297540 3304095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00462 98 1362 Calmodulin-binding Proteins AT2G36910 88.863 0.0 2300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00462 K05658 - qsa:O6P43_010256 2316.96