Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00451 ATGGCAAAAGACATTGAAGTTGGACCAGGTGGATTGGCTTCTAAAGACTATCAAGACCCACCACCCGCACCGCTCATTGATGCCGAGGAATTGACCCAGTGGTCATTTTACAGGGCCATCATTGCAGAGTTCATAGCAACGCTTTTGTTCTTGTATATAACAGTATTGACTGTGATTGGTTACAAGAGCCAGAGTGACACAAAAGCTGGCGGTGACCAATGTGGCGGAGTTGGTATCCTTGGCATTGCTTGGGCCTTTGGCGGTATGATCTTCATCCTCGTCTACTGCACAGCTGGAATATCTGGAGGGCACATCAATCCCGCAGTGACATTTGGCTTGTTCTTGGCACGGAAGGTGTCTTTAATTAGAGCTCTGTTGTACATGGTTGCTCAGTGCTTGGGGGCAATATGTGGGTGTGGACTAGTGAAGGCTTTCCAGAGCGCTTACTACGACAGATACGGTGGTGGCGCCAACTCGCTTGCTGATGGCTACAGCAAGGGCACGGGGTTGGGAGCTGAGATCATTGGTACCTTCGTTCTCGTCTACACTGTCTTCTCCGCCACTGATCCAAAGAGAAGCGCCAGGGATTCTCATGTTCCTGTATTGGCACCCCTTCCAATTGGATTCGCAGTGTTCATGGTCCACCTGGCCACCATCCCCGTCACTGGGACTGGCATCAACCCTGCTCGAAGTTTTGGAGCTGCAGTTATCTTTAACGAGGAGAAGGCCTGGAATGACCATTGGCTTTTCTGGGTCGGACCCTTCGTTGGTGCTGCCATTGCCGCATTCTACCACCAGTACATTTTGAGAGCGGGGGCAGCTAAAGCTCTCGGCTCTTTCCGCAGCTCCTCCAACATCTAA 861 0.5134 MAKDIEVGPGGLASKDYQDPPPAPLIDAEELTQWSFYRAIIAEFIATLLFLYITVLTVIGYKSQSDTKAGGDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRALLYMVAQCLGAICGCGLVKAFQSAYYDRYGGGANSLADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIFNEEKAWNDHWLFWVGPFVGAAIAAFYHQYILRAGAAKALGSFRSSSNI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00451 286 MobiDBLite consensus disorder prediction 1 21 - -
Pte15g00451 286 FunFam Probable aquaporin PIP1-2 23 284 - -
Pte15g00451 286 SUPERFAMILY Aquaporin-like 30 270 IPR023271 -
Pte15g00451 286 Pfam Major intrinsic protein 30 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 NCBIfam MIP family channel protein 42 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Pte15g00451 286 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 CDD MIP 38 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g00451 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 280 IPR034294 -
Pte15g00451 286 Gene3D Glycerol uptake facilitator protein. 23 286 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00451 Pte-Chr15 3187380 3189498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00451 1 287 Major Intrinsic Protein MIP AT2G37170 84.669 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00451 K09872 - cave:132192267 530.791