Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00448 ATGCGTTGTGTTCTATTCTTGTCGAGAAGTCTCAGTGGAGCTTTATACAATTCGTTCCATTATACGCGTATATTTTGTTTCTCTGAAATACCAAGAAGCCTTCAAACTTTACCGGAGATTCATTTCCTTTCTTTCCCTCCTTTTTGTTTGGCTGCAGTGAAAAAGAAAGGAAGTACTGACGGCAATAACCGCCGGAGACAAGTAAGTCGCCGGACCCATCCGCCAACGCCACCACCGATGATGCCTCAGCCGGAGACCACCAGCAGTAGGTATGTTTTTGCCGCTGGCTCGCCCTACCCTTCGCATTATCCCAACCCAAATGCTCCAAACTATTATCCATATCAGGGCTATTATCCGCCGCCGCCCCCAAGTATGCCGGTGCATTTGCCGAATCCTTATGATCACCATCACCAGGCACACGCGAACTGGCTGCCTGGCCGATACCCGTATCCGCGCCCTGTTATGACGAATCATATTCCTTATGTTGATCATCAGAAGGCGGTTACAATTAGAAATGATGTGAATCTCAAGAAGGAGACCTTGAGAATCGAGCCCGATGAGGAGCATCCTGGACGCTTCCTTGTTGCGTTCACGTTTGATGCTACAGTGGATGGCAGCATTACTATCTTTTTCTTTGCCAAAGAAGGTGAAGGCTGTAACATTACAACAACGAAGGAAAGCCTTCTTCCACCTGTCACTGTGAATTTCCAACAAGGGCTAGGACAGAAGTTTAGACAGCCATCTGGAACGGGAATTGACTTCTCGATGTTTGAGGAGTCTGAGTTACTTAAAGCAGGCGAATTGGATGTCTATCCTCTAATAGTGAAGGCAGAGGCGTCCTCAGTCAAACAAGATGAATCAAATGAAGCTGCAACTCCTGATATTCCAAACTCTCAGATAACTCGGGCAGTTTTTGAGAAAGAGAAAGGCGAACACCTTGTCAAGGAGGTCAGGCAGATTTTGTGGGTGAACAAGATGAGGTATGAATTGCAAGAGATATATGGCATTGGGAATTCAGTTGAGAATGACATTGATGGAGGTGATGGTGGAAAAGAATGTGTGATCTGCTTGTCAGAACCTCGTGATACGACTGTTCTCCCTTGTCGGCACATGGTATGCACATCTTTTTTGTTTTGTTTTTATGCCCTACTTCTCTAG 1158 0.4603 MRCVLFLSRSLSGALYNSFHYTRIFCFSEIPRSLQTLPEIHFLSFPPFCLAAVKKKGSTDGNNRRRQVSRRTHPPTPPPMMPQPETTSSRYVFAAGSPYPSHYPNPNAPNYYPYQGYYPPPPPSMPVHLPNPYDHHHQAHANWLPGRYPYPRPVMTNHIPYVDHQKAVTIRNDVNLKKETLRIEPDEEHPGRFLVAFTFDATVDGSITIFFFAKEGEGCNITTTKESLLPPVTVNFQQGLGQKFRQPSGTGIDFSMFEESELLKAGELDVYPLIVKAEASSVKQDESNEAATPDIPNSQITRAVFEKEKGEHLVKEVRQILWVNKMRYELQEIYGIGNSVENDIDGGDGGKECVICLSEPRDTTVLPCRHMVCTSFLFCFYALLL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00448 385 PANTHER MAHOGUNIN 99 373 IPR045194 GO:0061630
Pte15g00448 385 SUPERFAMILY RING/U-box 352 374 - -
Pte15g00448 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 380 IPR013083 -
Pte15g00448 385 MobiDBLite consensus disorder prediction 56 86 - -
Pte15g00448 385 Pfam Zinc finger, C3HC4 type (RING finger) 351 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00448 Pte-Chr15 3172987 3175598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00448 142 375 C3H Transcription Factor Family AT3G09770 62.397 1.44e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00448 - - qsa:O6P43_006673 400.979