Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00447 ATGGAGAGAACTTTTAATTCAGAAATTCAACTCCCTCCCGGGTTTAGATTCCACCCTTCTGATGAGGAGCTCATTATCCACTATCTGAGGAACAAAGTGGCTTCAAATCCGCTTCCTGGTTCTTTCATAGCAGAAATTGATCTTTATAAGTATAATCCATGGGATCTTCCAAAAAAAGCTTTGTTCGGAGACGATGAATGGTTTTTCTTTACTCCAAGGGACAGAAAGTATCCAAATGGATTAAGGCCAAATAGGTCAGCTGGTTCGGGTTATTGGAAAGCCACAGGCACTGACAAACCAATTCTCACTGCCTCTGGGATGAAGAGCATAGGAGTTAAGAAAGCCCTCGTGTTCTACCAAGGGCGTCCCCCAAAAGGTTCTAAGACTGATTGGATCATGCATGAATATAGATTGCTAGATTCAATCATCAGAAACTCTAGGAAAAAAGGATCCATGAGACTAGATGACTGGGTTCTTTGCCGGGTTCGACAGAAGAACAACCATTCTGGCAACAATGTGGAAGAACGGAAGGAAACTGGTGATGAACCACTCAACTTTCTGAAAGAAACTGCTCATCCAGCACCAAAAATCACGAACCATAATATTGAATTGGTTAAAAACTATATATACAACGAGTTTCCAATGCTACCCTACATTTTCGCTTCACTAAATTTACCAGTCAATGTTGGCTTAGCCTCCAGCACAAGCCTTCAACGCAGCGATGATAAAAGACCGTGTTATTCGTTTTATGAAGACAACACAGATATAATGGAAAGGCAGACATCACCAGCAGCAGCCGCAGCCGAAAGTTTGTGTAACCCCCTGAAAAGAAAACAGATGGAGGGAAATCAGCTGGACCTCAACATTCTACAGCAAAGTGAAAATTGCAAGGAGGAAGTTCAGACACCTGCAAGCGCAGTGGCAAAAGCTTGCTGTGAAACGGACCAGTACAGTGATTACAATTTCAACGACTTTGATCAATGGAGTTTCAATACACAATTAGATGACCTTAATAACTTGGAGTTGTGA 1029 0.4198 MERTFNSEIQLPPGFRFHPSDEELIIHYLRNKVASNPLPGSFIAEIDLYKYNPWDLPKKALFGDDEWFFFTPRDRKYPNGLRPNRSAGSGYWKATGTDKPILTASGMKSIGVKKALVFYQGRPPKGSKTDWIMHEYRLLDSIIRNSRKKGSMRLDDWVLCRVRQKNNHSGNNVEERKETGDEPLNFLKETAHPAPKITNHNIELVKNYIYNEFPMLPYIFASLNLPVNVGLASSTSLQRSDDKRPCYSFYEDNTDIMERQTSPAAAAAESLCNPLKRKQMEGNQLDLNILQQSENCKEEVQTPASAVAKACCETDQYSDYNFNDFDQWSFNTQLDDLNNLEL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00447 342 FunFam NAC transcription factor 20 169 - -
Pte15g00447 342 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Pte15g00447 342 SUPERFAMILY NAC domain 7 165 IPR036093 GO:0003677|GO:0006355
Pte15g00447 342 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Pte15g00447 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 267 - -
Pte15g00447 342 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00447 Pte-Chr15 3152243 3153496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00447 6 169 NAC Transcription Factor Family AT1G69490 65.244 4.08e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g00447 NAM 8.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00447 - - qsa:O6P43_010311 397.127