Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00441 ATGGCAGACTCTGATTTGGGTGATAAAGTCCCTCCAGCGTTTGATCGTATGGGAAATGTGATCAAGGATACTGAAGCAAGTGGGTTCAACCCAGGCTTGATAGTTTTGCTGCTTATTGGGGGTTTGCTACTGGCATTCCTTATCGGGAATTATGTACTCTACATGTATGCAAGGAAGACCCTTCCTCCAAGGAAAAAGAAGCCAGTCTCAAAGAAGAAGTTGAAAAAGGAGCGACTGAAGCAAGGTGTCTCCGCACCTGGGGAGTAG 267 0.4644 MADSDLGDKVPPAFDRMGNVIKDTEASGFNPGLIVLLLIGGLLLAFLIGNYVLYMYARKTLPPRKKKPVSKKKLKKERLKQGVSAPGE* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00441 88 MobiDBLite consensus disorder prediction 64 88 - -
Pte15g00441 88 PANTHER DNA-BINDING PROTEIN S1FA2 5 88 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pte15g00441 88 MobiDBLite consensus disorder prediction 64 78 - -
Pte15g00441 88 Pfam DNA binding protein S1FA 24 88 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00441 Pte-Chr15 3118141 3121823 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pte15g00441 S1FA 3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00441 - - csv:101213922 110.923