Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00436 ATGCATGGAGCAATAGAAACAATATCCCTACTCTTTGTACCGAAATATCACCTGTCGTGGCAGTCAGAAAAAGTTAAAACTGTTAAAGTCCCCAAATATGCGGGCAAGACCAATGAAGAGAGAGCTGCAATCAAGATTCAGACAGCTTTCAGGGGATACTTGGCAAGGAGAGCATTCCGAGCTTTAAGAGGGCTCGTTAGGCTCAAGTTGCTGATGGAGGGCCCCGTAGTGAGACGCCAAGCCATCAGTACCCTCAAGTCCATGCAGACTTTAGCTCGTGTACAATCTCAGATACATTCCAGAAGGGTCAGGATGCTAGAGGAGAACCAAGCTCTACAAAAGCAACTATTACAGAAACATGCAAAAGAGCTTGAGAGCATGCGGATTGAAGAGGAATGGGACGACAGCTTGCAGTCAAAGGAACAAGTTGAAGCGAAGTTATTCAACAAATATGAGGCTGCTATGAGAAGAGAAAGAGCATTAGCTTATGCATTTTCTCATCAGCAAAGCTGGAAGAATTCATCTAGATCAGTAAACCCCATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCTCGGCCATGGGAGGGTCGTAAGATTGACAGAGAACTTAACCATGATAACTCATCCGTAAAGAGTACAAGCCACAACAGTGCTGGTGGAGAAATCAGCAAGTCCTATGCTCGCTATCAACTCAATTCTGATAAATTTTCTCCATCTTCAAGTCAAAACCAAACCTCTCCTCACATCCAGCTTCATTCAGCTTCTCCCAAAGCAGTCACTGGATCAGTTGCCAGAAAACTGAAATCAGCGAGCCCAAAGGATAGCTTTGTTTCAGAGGATGATTCTAAAAGTATGGTCAGCATGAAATCAGAACGATATCGGAGGCACTCCATTGGAGGGTCATCTGTGAGAGATGATGAGAGCCTTGTAGGCTCTCCATCAGTTCCAAGTTACATGGTTCCAACTCAGTCTGCAAAAGCAAAAACAAGAATCCAAAGTCCGTTGGCTACAGAAAATGGAACTTCAGAGAACAGCTTAGTTGGAACTGCAAAGAAACGTCTCTCTTTCCCACCTTCGCCAGCCAGGGCAAGGCGCCATCCCGTTCCATCAAAATTAGAGAGCAGCTTAAATTCTGAAATAAGTGTGGGCAACGGGATTGGCCATTGA 1197 0.4536 MHGAIETISLLFVPKYHLSWQSEKVKTVKVPKYAGKTNEERAAIKIQTAFRGYLARRAFRALRGLVRLKLLMEGPVVRRQAISTLKSMQTLARVQSQIHSRRVRMLEENQALQKQLLQKHAKELESMRIEEEWDDSLQSKEQVEAKLFNKYEAAMRRERALAYAFSHQQSWKNSSRSVNPMFMDPTNPSWGWSWLERWMAARPWEGRKIDRELNHDNSSVKSTSHNSAGGEISKSYARYQLNSDKFSPSSSQNQTSPHIQLHSASPKAVTGSVARKLKSASPKDSFVSEDDSKSMVSMKSERYRRHSIGGSSVRDDESLVGSPSVPSYMVPTQSAKAKTRIQSPLATENGTSENSLVGTAKKRLSFPPSPARARRHPVPSKLESSLNSEISVGNGIGH* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00436 398 SMART iq_5 38 60 IPR000048 GO:0005515
Pte15g00436 398 MobiDBLite consensus disorder prediction 243 267 - -
Pte15g00436 398 Pfam IQ calmodulin-binding motif 40 60 IPR000048 GO:0005515
Pte15g00436 398 MobiDBLite consensus disorder prediction 243 398 - -
Pte15g00436 398 MobiDBLite consensus disorder prediction 282 312 - -
Pte15g00436 398 Gene3D - 24 66 - -
Pte15g00436 398 PANTHER IQ-DOMAIN 5-RELATED 30 369 - -
Pte15g00436 398 MobiDBLite consensus disorder prediction 325 359 - -
Pte15g00436 398 ProSiteProfiles IQ motif profile. 39 67 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00436 Pte-Chr15 3084104 3093840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00436 32 399 IQD Protein Family AT5G03040 56.989 2.90e-130 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00436 - - gmx:100800080 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00436 15 3084104 3093840 Pte15g00436 15 3084104 3093840 RCT