Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00426 ATGCCACCGAAGCAGCAAGGGAAAGCAGATGTAGCAAAGAAACAGAAGGTCGTAGAGGACAAGACCTTCGGGCTGAAGAACAAAAACAAGAGCAAAAGTGTCCAGAAGTATGTCCAGAACCTTAAGCAGTCCGTACAACCCAAACTTGATCCTTCCAAAGTAGCCGTCAAGAAAAAGAAGGAGGAAGAGAAGGCTAAAGAGAAGGAGCTGAATGAATTGTTTAAAGTTGCTATTAGTCAGCCGAAAGTCCCAGCTGGTGTTGATCCCAAGTCCATATTGTGTGAGTTTTTTAAAGCCGGACAATGTGCTAAAGGTTTCAAATGCAAGTTCTCTCATGATCTCAATGTTCAGAGGAAAGGAGAAAAGATTGATATCTACAGTGATAAGCGTGATCATGAAACAATGGAGGATTGGGATCAAGAGACCTTGGAGAAGGTGGTGGAATCAAAGAAGTCTGAGTACAACCAAAACAAACCTACTGATATTGTCTGCAAACACTTTCTTGACGCTGTTGAGAAGAAGCAATATGGTTGGTTTTGGGTCTGTCCTAATGGTGGTAAAAACTGCCACTACCGCCATGCTCTGCCTCCAGGGTATGTTTTAAAATCACAGATGAAGGCTTTGTTAGAAGAAGAAGCTGATAAGGTACCTGTTGAGGAAGAGATAGAAAATCAGCGAGCTAAATTGACAAGTTCAACACCTATGACTCCTGAACTATTCTTGCAATGGAAGAAGAAGAAGATGGATGAAAGAGATGCTGGTTTGGCTGTACAGAAGGCTGACAGAGCAAAGAATGATCGTATGAGTGGCCGTGAGCTCTTTCTCTCAGATGCAAGTTTGTTTATTGATGATGTTGGGGCATATGAAGAGTATCAGAGAGAGGAAGAAACACCTGGTGTGAATGAGCAGAAGGGCAGCGACGACCTTGCCAGAAATGGTGATTCTGCCTCAGCTAAAGCTGGCGCTGATATGGAAGATGACCCAGATGATGATGATGATGATGAACTGGATGTGGATGAGTTAAATGAGTTGGAATTTTTTCAGTGGGCGTCTGATGGCAATAGCATTCTTTCCAAGCAAACAATCTGGATTATGGACATTGGCCGTACGGTTCATTCAGATTCACCGCTGGATTACCTGCCAAAATCTTTGTACGCTAGGAATCTCTTGATATTGTGA 1179 0.43 MPPKQQGKADVAKKQKVVEDKTFGLKNKNKSKSVQKYVQNLKQSVQPKLDPSKVAVKKKKEEEKAKEKELNELFKVAISQPKVPAGVDPKSILCEFFKAGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDHETMEDWDQETLEKVVESKKSEYNQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEADKVPVEEEIENQRAKLTSSTPMTPELFLQWKKKKMDERDAGLAVQKADRAKNDRMSGRELFLSDASLFIDDVGAYEEYQREEETPGVNEQKGSDDLARNGDSASAKAGADMEDDPDDDDDDELDVDELNELEFFQWASDGNSILSKQTIWIMDIGRTVHSDSPLDYLPKSLYARNLLIL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00426 392 Gene3D - 87 203 - -
Pte15g00426 392 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Pte15g00426 392 SUPERFAMILY CCCH zinc finger 88 113 IPR036855 GO:0046872
Pte15g00426 392 Gene3D - 204 279 - -
Pte15g00426 392 MobiDBLite consensus disorder prediction 40 62 - -
Pte15g00426 392 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Pte15g00426 392 MobiDBLite consensus disorder prediction 290 336 - -
Pte15g00426 392 Pfam DRG Family Regulatory Proteins, Tma46 216 294 IPR032378 -
Pte15g00426 392 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 345 - -
Pte15g00426 392 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Pte15g00426 392 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Pte15g00426 392 Coils Coil 53 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00426 Pte-Chr15 3000681 3004152 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte15g00426 DFRP_C 8.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00426 - - rcu:8283836 549.28