Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00423 ATGGTGACACCCTGCTTCAAACCTCATGTCAATGGTGACAAAGAAAATGGCTCCCGCGGGAGAATCAATAAGCTTTTGTGGTACAAAGATCTGGGAAACCATATGTATGGAGAATACTCAATGGCTGTAGTACAGGCAAACCATGAACTGGAAGATCAAAGCCAATTTGAATCTGGACCCTTGAGTTTTAGCCAATTGGGTCCAACAGGGCTCTTCATCGGAGTATATGATGGTCATGGAGGCACTGAAGCTTCACAGTTTGTCAGCAGCAATCTTCTCTACAATCTCAAGAGATATGCAACTGATCATCATGGCATATCACAAACTGTTATTGAGAAGGCCTTTTCAGCAACAGATAATGACTTTCTCAGTCTAGTCAAAAAACAGTGGCTTGATAAACCAGAGATTGCAACTGTAGGATCATGTTGTTTGGTAGGGATAATCTGTGATGGAACGATGTTCATAGCAAATGCTGGAGATTCTCGTGTCCTGTTAGGAACTACGAGAAACTCCTCAAAGGATGTTGTAGGTATACAATTATCTACAGAGCATAATGTTTGTCAAGAAACTGTGAGAGAGGAACTGCGCTCATCACATCCATATGATTCGGAGATTGTAATCCGGAAACGCAAAGCTTGGCGTATTAAAGGCATCATACAGGTTTCGAGATCCATTGGGGATGCATATCTAAAAAGGGCAATCTTTAATGAGGAGCCTACACCATTTAGGTTCAGATTACCTGGACCGTTCCTCAAGCCAATACTCAGTTCGGAGCCATCAATATCAATACATAAAATCCAACCCGAAGATCAATTTCTCGTTTTTGCTTCTGATGGTTTATGGGAACTACTAAGCAACCAAGCAGTGGTGAACATTGTTCATAAATACCCACGAGAGGGAATTGCCAAAAGACTTGTGAAGGCTGCAATTAGAGAAGCAGCTAAGAAGAGACAGGCGAAGTACACGGATCTGAAGAAGATGAAACCAGGGAAGAGGAGAAACTTCCACGATGACATCACTGTCATAGTTGTGTATCTCAACATGAGACTGAATTGCGATAATTCTCATTCTAGTACTCTTATTTCGATAAAAGGAGGGAACCTGCTTATCCCAGATTGA 1119 0.4182 MVTPCFKPHVNGDKENGSRGRINKLLWYKDLGNHMYGEYSMAVVQANHELEDQSQFESGPLSFSQLGPTGLFIGVYDGHGGTEASQFVSSNLLYNLKRYATDHHGISQTVIEKAFSATDNDFLSLVKKQWLDKPEIATVGSCCLVGIICDGTMFIANAGDSRVLLGTTRNSSKDVVGIQLSTEHNVCQETVREELRSSHPYDSEIVIRKRKAWRIKGIIQVSRSIGDAYLKRAIFNEEPTPFRFRLPGPFLKPILSSEPSISIHKIQPEDQFLVFASDGLWELLSNQAVVNIVHKYPREGIAKRLVKAAIREAAKKRQAKYTDLKKMKPGKRRNFHDDITVIVVYLNMRLNCDNSHSSTLISIKGGNLLIPD* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00423 372 SMART PP2C_4 32 344 IPR001932 -
Pte15g00423 372 FunFam Probable protein phosphatase 2C 42 29 354 - -
Pte15g00423 372 ProSiteProfiles PPM-type phosphatase domain profile. 38 346 IPR001932 -
Pte15g00423 372 Pfam Protein phosphatase 2C 69 315 IPR001932 -
Pte15g00423 372 CDD PP2Cc 36 346 IPR001932 -
Pte15g00423 372 SMART PP2C_SIG_2 51 346 IPR001932 -
Pte15g00423 372 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Pte15g00423 372 Gene3D - 26 354 IPR036457 -
Pte15g00423 372 PANTHER PROTEIN PHOSPHATASE 30 345 IPR015655 GO:0004722|GO:0006470
Pte15g00423 372 SUPERFAMILY PP2C-like 36 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00423 Pte-Chr15 2974020 2975877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00423 1 369 PP2C-type Phosphatase Gene Family AT3G55050 58.713 1.64e-162 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00423 K01102 - vvi:100241474 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00423 15 2974020 2975877 Pte15g00423 15 2974020 2975877 RCT